Gene Cphamn1_2051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2051 
Symbol 
ID6375744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2213581 
End bp2214051 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content48% 
IMG OID642684542 
Productprotein tyrosine phosphatase 
Protein accessionYP_001960442 
Protein GI189500972 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000114311 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.145074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATG CACTGCTGTT TGTCTGTTAT GAAAATATAT GCCGTTCGCC AATGGCCGAA 
GGGATTTTTT CGAGGCTTGT TGCGGAGGGA ATGAGTCATG ATCTGTTTAC CGTGGCATCA
GCCGGAACGG TCTGTTCCCA GAAAGGAGAA CCGCCTGACA GTCGGGCAGT CTCAACCGCA
TTAGCGCACG GGATTGATAT TTCAGCACAA AGGGCCCGCT GTATCCACGA TATGGAGATT
GACCGGTTTA CGAAGATATT TGTCATGGAC GTGGACAACT ACCATGATGT TATCCGGTAC
GGTAACTCCA TGAGTGAGTC CCTTCCGGTA ACTATGGTGG CCGATTACCT GGCGGATTCT
GCTGTGGACA CGATTGAGGA TCCCTACTAC GGGACAACAG ATGATTTTAT GTCGGTGTAT
TACCTTCTCT CTGAGGCATT GGGTAATATT TACAAGGAAT TATCGCCTTG A
 
Protein sequence
MKHALLFVCY ENICRSPMAE GIFSRLVAEG MSHDLFTVAS AGTVCSQKGE PPDSRAVSTA 
LAHGIDISAQ RARCIHDMEI DRFTKIFVMD VDNYHDVIRY GNSMSESLPV TMVADYLADS
AVDTIEDPYY GTTDDFMSVY YLLSEALGNI YKELSP