Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2051 |
Symbol | |
ID | 6375744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2213581 |
End bp | 2214051 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642684542 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001960442 |
Protein GI | 189500972 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000114311 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.145074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCATG CACTGCTGTT TGTCTGTTAT GAAAATATAT GCCGTTCGCC AATGGCCGAA GGGATTTTTT CGAGGCTTGT TGCGGAGGGA ATGAGTCATG ATCTGTTTAC CGTGGCATCA GCCGGAACGG TCTGTTCCCA GAAAGGAGAA CCGCCTGACA GTCGGGCAGT CTCAACCGCA TTAGCGCACG GGATTGATAT TTCAGCACAA AGGGCCCGCT GTATCCACGA TATGGAGATT GACCGGTTTA CGAAGATATT TGTCATGGAC GTGGACAACT ACCATGATGT TATCCGGTAC GGTAACTCCA TGAGTGAGTC CCTTCCGGTA ACTATGGTGG CCGATTACCT GGCGGATTCT GCTGTGGACA CGATTGAGGA TCCCTACTAC GGGACAACAG ATGATTTTAT GTCGGTGTAT TACCTTCTCT CTGAGGCATT GGGTAATATT TACAAGGAAT TATCGCCTTG A
|
Protein sequence | MKHALLFVCY ENICRSPMAE GIFSRLVAEG MSHDLFTVAS AGTVCSQKGE PPDSRAVSTA LAHGIDISAQ RARCIHDMEI DRFTKIFVMD VDNYHDVIRY GNSMSESLPV TMVADYLADS AVDTIEDPYY GTTDDFMSVY YLLSEALGNI YKELSP
|
| |