Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2047 |
Symbol | |
ID | 6375740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2209810 |
End bp | 2210547 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642684538 |
Product | hypothetical protein |
Protein accession | YP_001960438 |
Protein GI | 189500968 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0014212 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.263203 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGCTA CAGTGAAAAA ATCCGATAGA AAGGATGTGG TGAGCGGTAA AGTACTGCCT CCCGATAAAG AATTTTCTCT CCAGACCGAT TTTGCCGGTG ACGGGTGGAG GGTGTTCAAG ATCATGGCTG AATTTGTGAG CGGGTTTGAA AAAATGTCAG ATATCGGTCC GTCGGTAAGT GTTTTCGGTT CGACAAGGCT GGATTCCGGG ACCCCTGACT ACATTCTTGC AGAACGTATG GGCAGGCTTC TCGCGGAAGA AGGTTTTTCG GTGATAACAG GGGGAGGGCC CGGCGCGATG GAAGCGGCCA ACAAGGGGGC TCAGGAGGCA GGGGGCGTAT CAATAGGTTT CAATATTGAA CTGCCTAATC AACAGAGCCC CAACCTGTAT ATCGATCGTG ACAGGATCCT GACCTTTCAG TACTTTTTTG TTCGCAAGGT TATGTTTTTG AAATATTCGC AGGCATTTAT CGTGCTTCCC GGAGGATTTG GTACCATGGA CGAATTTTTC GAGGCAGCCA CAATCATACA GACCGGGAAA AGCAGCCGTT TTCCGGTGAT CTTGATGGGA AGCGACTACT GGGAGGGTTT CTACACATGG ATGCAGGAGA AGATGTGTAA AGAAAAAAAA TATATCTCGA ACAAAGAGCT GGATATTTTG TTTATGGAGG ATGATCCGGA CCGGGTGATC GGGATTATCA AAAGTTTTTA TCCGGAAGGC TACAAGCTGA ATTTCTGA
|
Protein sequence | MPATVKKSDR KDVVSGKVLP PDKEFSLQTD FAGDGWRVFK IMAEFVSGFE KMSDIGPSVS VFGSTRLDSG TPDYILAERM GRLLAEEGFS VITGGGPGAM EAANKGAQEA GGVSIGFNIE LPNQQSPNLY IDRDRILTFQ YFFVRKVMFL KYSQAFIVLP GGFGTMDEFF EAATIIQTGK SSRFPVILMG SDYWEGFYTW MQEKMCKEKK YISNKELDIL FMEDDPDRVI GIIKSFYPEG YKLNF
|
| |