| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2015 |
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| Symbol | rplM |
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| ID | 6375708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2167837 |
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| End bp | 2168289 |
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| Gene Length | 453 bp |
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| Protein Length | 150 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642684506 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_001960406 |
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| Protein GI | 189500936 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.624053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAGA CGATAAGTTT CAAGACATAT TCGGCAAAAC CAGGTGAAGT GGAACGAAAA
TGGTATGTCG TTGACGCAGA AGGCAAAGTG CTGGGCCGTC TTGCCAGTGA GATCGCGACG
ATTCTGCGCG GAAAACACAA ACCGCAGTTC ACACCCCATG TCGATACGGG TGATTTCGTT
ATTGTGACAA ACGCCGGTAA AATCGGTTTG AGCGGCAAGA AGCTGGATCA GAAAACCTAT
TTCTCCCATT CAAATTATCC CGGCGGCGTG AAAATAGAGA ACCTCAAGGA CATGCTCCGG
AAAAAACCTG AAAAGGTTAT CGAGAAAGCT GTATGGGGTA TGTTGCCGCA CAATAATCTC
GGGAGAGCGC TTTTCAAGAA ACTCAAGGTC TACGCAGGTC CGGAGCATCC GCATGTGTCT
CAGAGTCCTG TTGAAATGAA GGTTAACCAA TAA
|
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| Protein sequence | MSKTISFKTY SAKPGEVERK WYVVDAEGKV LGRLASEIAT ILRGKHKPQF TPHVDTGDFV
IVTNAGKIGL SGKKLDQKTY FSHSNYPGGV KIENLKDMLR KKPEKVIEKA VWGMLPHNNL
GRALFKKLKV YAGPEHPHVS QSPVEMKVNQ
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