| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2000 |
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| Symbol | rpsA |
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| ID | 6375693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2151684 |
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| End bp | 2153459 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642684492 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001960392 |
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| Protein GI | 189500922 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000749746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.10797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAA CGCAAACAAT CGAACAAAAG AAGGTAGTTG AGAAAGGGCC TAAAAACCAT
CATGTGAAGT TTTTCGCAAA CTACGACTCT TCGGAACTTG ACCAGATGGA GCTGCTCTAT
TCGAGCACGC TTAACGAGAT TACCGAAGAG GAAATCGTTA AAGGTACTAT TGTCGCCATT
TCGAACAAGG ATGTTACCAT TGATGTCGGA TTTAAATCCG AGGGTATCGT TTCGAAGCTT
GAGTTCAAGG ACGAAGAAGA GCTGCAAGTC GGTGACGAGG TAGAAGTATA CCTCGAAAAC
ATCGAAGACA AAATGGGACA GCTTATTCTC TCGAAGAGAA AAGCGGACGT TCTGAGGATC
TGGGACAAAA TCTATGATTC CATCGAGAAC GACACCATTA TCAACGGAAA GATAATTAAC
CGTGTCAAGG GCGGTATGAC GGTTTCGCTT TCCGGAGTCG AGGCATTTCT TCCGGGTTCG
CAGATCGACG TCAAACCTGT GCGCGACTTC GATGCGCTCG TAGGACAGAC AATGGACTTC
AGAGTGGTAA AAATCAATCC TGTGACACAG AATATCGTTG TCAGTCACAA GGTTATTCTC
GAAGAAGAGT ACGCCGCGAA GCGCGAAGAG ATGCTTGCCA ATATCAAGGT GGGTATGATT
CTCGAGGGTT CAGTAAAGAA TATCACCGAT TTCGGTATTT TTGTCGACCT TGGCGGTCTC
GACGGGCTTG TTCATATTAC CGATATCACC TGGGGCAGGA TCAATCATCC TTCAGAAGTT
GTCGACCTTG ATCAGCCGAT CAAAGTTGTT GTTGTTGCTT TTGACGAAAA TACCAAGAGG
GTCTCTCTCG GGATGAAGCA GCTTGAATCT CATCCTTGGG AAAATATCGA GATCAAGTAC
CCTGTAGGCA TCAAAACGAA CGGTCGAGTT GTTTCCATTA CTGATTACGG CGCATTTGTC
GAGATAGAAA AAGGTATTGA AGGCCTTGTT CACATCTCTG AAATGAGCTG GACTCAGCAC
ATCAAGCATC CAAGCCAGTT TGTTACTCTC GGTCAGGAAG TTGAATGTGT TATCCTCAAT
GTCGATAAAG AGCACACCAA GCTATCGCTT TCCATGAAGC GGGTGAACGA AGATCCATGG
ATCGCTCTTT CAGAAAAATA TATCGAGAAT TCCCTGCACA AAGGTACAGT CAGCAACATT
ACCGATTTCG GTGTTTTTGT CGAGCTTGAG CCCGGAGTCG ATGGCCTTGT GCACATTTCA
GATCTCTCCT GGACGAAGAA GATTCGCCAC CCGAGTGAAC TGGTCAAAAA GAATCAGGAC
CTTGAGGTAA AAGTGTTGAA ATTTGATGTC AACGCCCGCC GAATCGCGCT TGGTCACAAG
CAGATCAACC AGGATCCGTG GGATGAATTC GAACAGAAAT ATGCGGTCGG GGCGGAGTGT
GCCGGAAAAA TATCGCAGAT CATAGAAAAA GGCGTTATCG TTATCCTTCC TGGTGACGTT
GACGGTTTTG TTCCGGTATC GCATCTTCTT CAGGGTGGCG TTAAGGACAT TAACGCATCC
TTCAAGGTTG AAGATGAACT GCCGCTTCGT GTTATCGAGT TCGATAAGGA AAACAAACGG
ATTATTCTCT CGGCGCTCGA ATATTTCAAA GATAAGAGCA AAGAGGAGAT TGAAGCCTAC
CTTCAGGCTC ATCCGAATGA AAAGAAAGAG ATTGAGGATG CCACTGCCGA GCTGGATTCA
CAATCAAATA CCGATGACGC TAAAGACGGC GAGTAA
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| Protein sequence | MSETQTIEQK KVVEKGPKNH HVKFFANYDS SELDQMELLY SSTLNEITEE EIVKGTIVAI
SNKDVTIDVG FKSEGIVSKL EFKDEEELQV GDEVEVYLEN IEDKMGQLIL SKRKADVLRI
WDKIYDSIEN DTIINGKIIN RVKGGMTVSL SGVEAFLPGS QIDVKPVRDF DALVGQTMDF
RVVKINPVTQ NIVVSHKVIL EEEYAAKREE MLANIKVGMI LEGSVKNITD FGIFVDLGGL
DGLVHITDIT WGRINHPSEV VDLDQPIKVV VVAFDENTKR VSLGMKQLES HPWENIEIKY
PVGIKTNGRV VSITDYGAFV EIEKGIEGLV HISEMSWTQH IKHPSQFVTL GQEVECVILN
VDKEHTKLSL SMKRVNEDPW IALSEKYIEN SLHKGTVSNI TDFGVFVELE PGVDGLVHIS
DLSWTKKIRH PSELVKKNQD LEVKVLKFDV NARRIALGHK QINQDPWDEF EQKYAVGAEC
AGKISQIIEK GVIVILPGDV DGFVPVSHLL QGGVKDINAS FKVEDELPLR VIEFDKENKR
IILSALEYFK DKSKEEIEAY LQAHPNEKKE IEDATAELDS QSNTDDAKDG E
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