Gene Cphamn1_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1998 
Symbol 
ID6375691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2148342 
End bp2149568 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content45% 
IMG OID642684490 
Productrod shape-determining protein RodA 
Protein accessionYP_001960390 
Protein GI189500920 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0772] Bacterial cell division membrane protein 
TIGRFAM ID[TIGR02210] rod shape-determining protein RodA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0307055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0830692 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAATC GATACAACAA GCTGGATGTA TGGTTGTTCG GGTTTATGGC CGGGCTTATA 
GTTTTTGGTC TGCTTGCGAT ATACAGTGCC AGTAACGGAG TGGGGGCAAT CGATCTTTTC
TATAAGCAGT TTATATGGTT CGGTATCGGT TTGATCGTCA TGGCTGTCGT ATATTATACT
GATCACAGGA TGATAATGGA GTATTCCTAT GGTTTATATG TTTTTGGTTT ATGTCTTCTT
GTCATTGTTT TACTCTTCGG AACCAAAGTC GCAGGTGCCA CCAGTTGGGT TCGTATAGGT
TTTATCAATA TTCAGCCTTC AGAAATAGCA AAAGTCACGA CAATTCTTGC TCTTGCAAGA
TTTCTTTCAA GCGATAGTAC AGATATCACA TCCCCGAAAC ATGTTCTGAT AGCGATTTCC
ATAGCTGTCA TACCCGCAAT GCTGGTCATG CTTCAGCCCG ATATGGGAAC GACGCTAACC
TACCTCTCTT TTCTTTTTCC TGTCATGATC ATGGCCGGGT TCAATGTGTA TTATCTTTTG
CTCATGGTAC TGCCGCTCGT TCTTGCAGTT GTTGGCTTTT TTAATCTCTA TATACTTATA
CTGCTTACGC TTATAGTTTT CGCGGTTTTA GTGTATCTGC GAAAGGGGTT TCATTATTCG
CAGCTTCTTG TATCGCTTGC CGGTCTTGCC GGCGGAGTGC TCACCTCACG ATTTGCCGCA
GATATTCTGC AGCCCCACCA GATGAAGCGA ATTCAGACCT TTCTTGACCC GATGTCGGAT
CCTCAGGGCG CTGGCTATAA CGCGCTTCAG GCAAAAATCG CTATTGGTTC CGGTGGAATA
TTCGGTAAAG GGTTTCTTGA GGGAACGCAG ACACAGCTGC GTTTTATCCC TGCTCAATGG
ACGGATTTTA TTTTCTGTGT TATCGGTGAA GAAATGGGGC TCTTAGGCAG CATTGTGCTG
CTCAGTCTTT TTCTCGCTCT GTTTTTGAGA ATGCTCTGGC TTGTAAGCGT TATCAAAAAC
AAGTATGTCG AGCTGACGCT TGTCGGTTTT GTTTCTCTCT GGCTTGTTCA TGTGATAATC
AATATCGGCA TGACTATAGG CCTTTTTCCT GTTATCGGCG TACCGCTCCC GTTTCTTTCC
TACGGTGGCT CATCGCTGCT TGGTAACATG CTTATGGTGG CCCTCGCGCT GAACTTTGTC
AGAAACAAGC GCAATCTGGG GTATTGA
 
Protein sequence
MVNRYNKLDV WLFGFMAGLI VFGLLAIYSA SNGVGAIDLF YKQFIWFGIG LIVMAVVYYT 
DHRMIMEYSY GLYVFGLCLL VIVLLFGTKV AGATSWVRIG FINIQPSEIA KVTTILALAR
FLSSDSTDIT SPKHVLIAIS IAVIPAMLVM LQPDMGTTLT YLSFLFPVMI MAGFNVYYLL
LMVLPLVLAV VGFFNLYILI LLTLIVFAVL VYLRKGFHYS QLLVSLAGLA GGVLTSRFAA
DILQPHQMKR IQTFLDPMSD PQGAGYNALQ AKIAIGSGGI FGKGFLEGTQ TQLRFIPAQW
TDFIFCVIGE EMGLLGSIVL LSLFLALFLR MLWLVSVIKN KYVELTLVGF VSLWLVHVII
NIGMTIGLFP VIGVPLPFLS YGGSSLLGNM LMVALALNFV RNKRNLGY