Gene Cphamn1_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1964 
Symbol 
ID6375656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2112961 
End bp2113386 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content52% 
IMG OID642684456 
ProductPilT protein domain protein 
Protein accessionYP_001960357 
Protein GI189500887 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.313407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATTC TTGATACCAA CGTTCTCTCG GCCCTGATGC AGCAGCAATC CGACCTGCAG 
GTTGTGAACT GGGTTGACAC TCAACCCCCA GAATCCATCT GGGTGAGCAG CATTACCATA
TTTGAAGTTC GCTATGGCTT GTCTCTTTTG GCCTCTGGTC AACGCAAACA TGTACTGGAG
GCGCGATTTG AGGCGCTTTT GCGTGATGAA CTACAAAGCC GCGTCCTTGT CTTTGATGCC
GATGCTGCAA AAGCGGCAGC CCGACTGGCG GCTGAACTAA AGGAAGTCGG CCGTCCCGTA
GATATGCGAG ACACATTTAT TGCTGGAATT GCATTGGCAA ACCGTGCGAC GCTCGCCACC
CGAAACATCC GGCACTTCAA CGATTTGAGT GTAGCAGTAG TCAATCCATG GGATAGATGC
TGCTGA
 
Protein sequence
MIILDTNVLS ALMQQQSDLQ VVNWVDTQPP ESIWVSSITI FEVRYGLSLL ASGQRKHVLE 
ARFEALLRDE LQSRVLVFDA DAAKAAARLA AELKEVGRPV DMRDTFIAGI ALANRATLAT
RNIRHFNDLS VAVVNPWDRC C