Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1964 |
Symbol | |
ID | 6375656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2112961 |
End bp | 2113386 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642684456 |
Product | PilT protein domain protein |
Protein accession | YP_001960357 |
Protein GI | 189500887 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.313407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATTC TTGATACCAA CGTTCTCTCG GCCCTGATGC AGCAGCAATC CGACCTGCAG GTTGTGAACT GGGTTGACAC TCAACCCCCA GAATCCATCT GGGTGAGCAG CATTACCATA TTTGAAGTTC GCTATGGCTT GTCTCTTTTG GCCTCTGGTC AACGCAAACA TGTACTGGAG GCGCGATTTG AGGCGCTTTT GCGTGATGAA CTACAAAGCC GCGTCCTTGT CTTTGATGCC GATGCTGCAA AAGCGGCAGC CCGACTGGCG GCTGAACTAA AGGAAGTCGG CCGTCCCGTA GATATGCGAG ACACATTTAT TGCTGGAATT GCATTGGCAA ACCGTGCGAC GCTCGCCACC CGAAACATCC GGCACTTCAA CGATTTGAGT GTAGCAGTAG TCAATCCATG GGATAGATGC TGCTGA
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Protein sequence | MIILDTNVLS ALMQQQSDLQ VVNWVDTQPP ESIWVSSITI FEVRYGLSLL ASGQRKHVLE ARFEALLRDE LQSRVLVFDA DAAKAAARLA AELKEVGRPV DMRDTFIAGI ALANRATLAT RNIRHFNDLS VAVVNPWDRC C
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