| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1892 |
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| Symbol | |
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| ID | 6375584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2056712 |
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| End bp | 2057317 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642684389 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001960290 |
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| Protein GI | 189500820 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.210482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00858822 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTATATGA AATATACAGC TGCTGCGATT CCCGACGTTT TGGTTTTTGA ACCGCGGGTG
TTCGGGGACA GCCGGGGGTA TTTTTTTGAG TCTTTCAGGA AAGATATTCT GCAGGAACAT
GTCGGTAAGG TTGATTTTGT TCAGGATAAT CAGTCGAAGT CCGGCTACGG TGTCCTGCGG
GGGCTGCATT TTCAGAAGCC GCCGTTCACC CAGTCGAAGC TTGTCCGTGT CATTGCGGGA
GCTGTGCTCG ATGTGGCGGT TGATATTCGG GAGGGGTCGC CCTGGTATGG CCGGCATGTT
GCTGTGAAAC TGGATTCAGA AAGGAACAAC ATGCTGTGGA TCCCCCAGGG ATTCGCGCAC
GGCTTTATCG TGCTATCCAA AGAAGCGATC TTTTCCTATA AGTGCGATAA CTATTATGCT
CCAGACTATG ATGCTGGTAT ACGGTGGAAT GATAAAGCGT TAGGAATTGA CTGGACACTA
CCGGAAGAGG ATATTCAGGT TTCAGACAAA GATGCTTCCC TGCCGTTCCT CAAAGAGGCG
TACCATTTTT CCTACGATGA TTTCCGGCAG GAGAAGGTGT ATCCGAGGAA TGGGGGAAAT
GACTAA
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| Protein sequence | MYMKYTAAAI PDVLVFEPRV FGDSRGYFFE SFRKDILQEH VGKVDFVQDN QSKSGYGVLR
GLHFQKPPFT QSKLVRVIAG AVLDVAVDIR EGSPWYGRHV AVKLDSERNN MLWIPQGFAH
GFIVLSKEAI FSYKCDNYYA PDYDAGIRWN DKALGIDWTL PEEDIQVSDK DASLPFLKEA
YHFSYDDFRQ EKVYPRNGGN D
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