Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1882 |
Symbol | |
ID | 6375573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2042245 |
End bp | 2043099 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642684378 |
Product | endonuclease IV |
Protein accession | YP_001960280 |
Protein GI | 189500810 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0101436 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTACA TCGGAGCACA TGTCAGTATT GCCGGCGGCA TTGAAAACGC CCCGCTCAGG GCACAAGAGA TCGGGGCGAC CGCTTTTGCC CTGTTCACTA AGAACCAGCG TCAATGGAAA GCTCCGGCTC TGACTGCAAA AACCATAGAG GCGTTCAGAG AAAACTGCGA GCGCTGCGGT TACAGGCCTG AGCACATTCT GCCGCACGAC AGCTATCTGA TCAATCTCGG AAGTCCCGAT GCGCAAAAAC TCGACCGCTC ACGCAACGCG TTTATCGACG AGATGCAGAG AACAGAAGCT CTGGGACTGG TCCGGCTTAA CTTGCATCCC GGCAGCCATC TGAGAGAGAG CAGTGAAGAA GCATGCCTTG AAACCATTGC AGAATCTGTC AATCTTGCGC ATGAAGCGAC GAATACGGCA GTCGCGGTAC TGGAAAACAC CGCCGGTCAG GGATCAAACC TCGGGCACAC GTTTGAACAG CTCGCCTTCA TCATTCAAAG AGTGCATGAC AAATCCAGGG TTGGTGTCTG CCTCGATACC TGTCACCTTT TTGCAGCAGG CTACGATCTT CGCACTGAAG AAGCGGTCAA CGGAATGTTC GAACTGTTTG ACGCGTCAAT AGGACTCCAC TACCTGAAAG GGATGCACCT TAACGACGCA AAACCTGAAC TGGACAGCAG ACGTGACCGG CATGAGAGTA TCGGCAAAGG AAAGATCGGG CTTGACGGGT TTGCAGCCAT CATCCGGCAT CCCGCGAGTG CGGAAATCCC CCTGATCCTC GAAACTCCGC AACCCGAAAT CTGGAGTGAA GAGATCACCC TGCTCCGGAG TTTTGAAGAA GCACAGAATT GTTGA
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Protein sequence | MRYIGAHVSI AGGIENAPLR AQEIGATAFA LFTKNQRQWK APALTAKTIE AFRENCERCG YRPEHILPHD SYLINLGSPD AQKLDRSRNA FIDEMQRTEA LGLVRLNLHP GSHLRESSEE ACLETIAESV NLAHEATNTA VAVLENTAGQ GSNLGHTFEQ LAFIIQRVHD KSRVGVCLDT CHLFAAGYDL RTEEAVNGMF ELFDASIGLH YLKGMHLNDA KPELDSRRDR HESIGKGKIG LDGFAAIIRH PASAEIPLIL ETPQPEIWSE EITLLRSFEE AQNC
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