Gene Cphamn1_1844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1844 
Symbol 
ID6375535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2001739 
End bp2002188 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content46% 
IMG OID642684340 
Productsiroheme synthase 
Protein accessionYP_001960242 
Protein GI189500772 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.204715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.1254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT TTTTACCGCT GAATATCAGG GTGGACGACA AGCAGCTCCT GTTTGTCGGA 
GGAGGAAACA TCGCTATGCA CAAGATACAG ACGGTGGAGA AGTATACCCG AAACATTACC
ATCGTCGCTC CCGAGATCCA TGAAGAACTT CAGGGAAAAG GGTTTCGTCT TGTTTTTAAG
GAATATGATC CATCCGATAT CGAGGGGCAT TTTCTTGTTT ATGCGGCGAC AGACAATATG
GAGGTAAACC GTAAGATTAA ACGGGACGCT GAAGAGCGAG GTATCATGGT CAATGTTGTG
GATAACCGCG AGCTGTCGGA CTTTATTTCA CCGGCGATCT ACAAGAAAGA TGAAATGACT
ATCGCTATCT CGTCAAACGG CCAGAATGTG AAGAAGGCCG TTGCCTGGAG AAATAAAATC
AGGGAAACGT TTCAGGAAGA GGGAAAGTGA
 
Protein sequence
MKVFLPLNIR VDDKQLLFVG GGNIAMHKIQ TVEKYTRNIT IVAPEIHEEL QGKGFRLVFK 
EYDPSDIEGH FLVYAATDNM EVNRKIKRDA EERGIMVNVV DNRELSDFIS PAIYKKDEMT
IAISSNGQNV KKAVAWRNKI RETFQEEGK