Gene Cphamn1_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1815 
Symbol 
ID6375502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1964218 
End bp1965492 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content52% 
IMG OID642684308 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_001960214 
Protein GI189500744 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0555814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAAT TTGTCATTCA GGGAAGACGT CGTCTCAACG GGACAGTCAG GGCATCCGGC 
TCGAAAAACT CGGCACTCCC GCTCATCGCG GCGACACTGC TTACGGAACG CGGAGAGATA
ACACTGGAGC GCATTCCCGA TCTGAAAGAT ATCCGGACAT TCCGGAAACT GCTTGAATAT
CTCGGTGCCG ATATACGCTA CCGGGAAAAT ACCCTGACAG TCTCTGCCTC GAACATCAGA
TGTGTTCAGG CGCCATACGA GCTGGTGAAA CAGATGCGGG CGTCAATTTA TGTGCTCGGT
CCGCTCCTTG CCCGTTTCGG GCGCGCCAGC GTCTCACTTC CGGGAGGGTG TGCATTTGGC
CCCAGACCCA TTGACCTTCA CCTCATGGCA ATGGAAAAAC TTGGCGCCAC AATCTCTATC
GAAAAAGGTT TTATCGAAGC TCAGATACAA GGCAGCCACC TCAAGGGCGC AGTGATAGAC
TTTCCGATAA CTTCGGTAGG AGCAACAGGA AACGCGCTTA TGGCCTCGGT TCTTGCGCGA
GGAAAAACAA CGATCCAGAA CGCTGCTGTA GAACCGGAAA TCGTGACCCT ATGCAATTTC
CTCTGCGCGA TGGGAGCGGA TATACGGGGA ACAGGAACTT CTACTCTTGA AATAAACGGT
GTTGAGAGCC TCAAACCTGC CCCTTTCACG AACATATTCG ACAGGATTGA AGCGGCGACG
CTTCTTACGG CCGGAGCCAT TACCGCTAGC TCCATTACCG TAGATGATGT CGATCCTTCA
CAACTGACAG CGATTCTGGG AAAATTTGAA CATGCCGGAT GCAAGATTAT TACCGACAGA
ACGTCTATTA CCCTGCAAAG CCCTGAAACG CTTTCACATA CAGATGTCAT CGCGAATCCA
TACCCGGACT TCCCTACCGA TATGCAGGCT CAGTGGATTG CGCTCATGAC CCAGGCTGAG
GGCACCAGTC ATATCATAGA CAAAGTCTAT CACGAACGAT TCAATCATAT TCCTGAACTC
AACCGGCTCG GCGCTCGTAT TGAGATCAGG AATAACGAAG CAAGCGTTTA CGGACCAAGC
CGGCTGACCG GAACAAAAGT GATGTCAACC GACCTCAGAG CATCAGCCAG TCTCGTACTT
GCCGGGCTTG CCGCTGAAGG AGTTACGGAA GTGCTGAGAA TCTATCATCT TGACCGCGGC
TACGAGAAAC TCGAAGATAA ACTCAAACAA CTCGGGGCGG ATATAACACG GGAATCGTAC
CAGGAGTTCA CATGA
 
Protein sequence
MDKFVIQGRR RLNGTVRASG SKNSALPLIA ATLLTERGEI TLERIPDLKD IRTFRKLLEY 
LGADIRYREN TLTVSASNIR CVQAPYELVK QMRASIYVLG PLLARFGRAS VSLPGGCAFG
PRPIDLHLMA MEKLGATISI EKGFIEAQIQ GSHLKGAVID FPITSVGATG NALMASVLAR
GKTTIQNAAV EPEIVTLCNF LCAMGADIRG TGTSTLEING VESLKPAPFT NIFDRIEAAT
LLTAGAITAS SITVDDVDPS QLTAILGKFE HAGCKIITDR TSITLQSPET LSHTDVIANP
YPDFPTDMQA QWIALMTQAE GTSHIIDKVY HERFNHIPEL NRLGARIEIR NNEASVYGPS
RLTGTKVMST DLRASASLVL AGLAAEGVTE VLRIYHLDRG YEKLEDKLKQ LGADITRESY
QEFT