Gene Cphamn1_1803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1803 
Symbol 
ID6375490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1951164 
End bp1952021 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content46% 
IMG OID642684296 
Productrod shape-determining protein MreC 
Protein accessionYP_001960202 
Protein GI189500732 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAACT TTTATAAAGT ATTCAAGAAT AACAACGCCT ATCTGCTTCT GCTTTTCTAT 
TGCAGTATAG CAGGCCTTCT CATCAAGTTT GAGCAGGACT ATTCTCTACA AAATCTTCTT
TCCAGAGGGA TTGAATTGAG AGCGGGAGTG TCTCAGCGGC TCAGCGATAT ATATCGCTAC
CTCCAACTCA ACGATGAAAA TGAAAAACTG GCACTGCAAA ATTCCGTACT GCTCGCAGAA
ATTATTGAAC AGGGATCCGT ACTGAGGGAT TCAGCCAGTA TCAACCGTAC CGCTCGTTTT
ATCGACAGCA GCCCGATCAG CTTTATCCAT GCAAGGATAG TGGAAAGAAG ATTCAATACC
AATGAAAACC TGCTGATCAT CAACGCAGGT ATTAAGCAGG GGGTTGAGGT TGACATGGCC
GTCATGACTC CCGAAGGACT GGTAGGAAGA GTCATTCAGG TTTCGAATAA TTACGCGAAG
GTCATGCCGG TTATCCACGC GGAGTTCAGT GTCAGTGTGG TCTCTGACAG CAACAGCACA
CAAGGAATTC TGAGCTGGAA CGGAAAGCAG GAACAGCTTG CTCAGATGGA CTATGTCCCG
TTGAGCAGCT CAATAGGAGT CAATGAAAAA ATCCACACGG CAGATTTCAG TACCTTTGCC
ATCAGAGGCA TTCCTGTCGG GCAAGTGCTC AATGTGGAAC CTGATCAAAA GTTTTACCGG
GTAGATGTCC GGCTCGGCGC TGACTTCTCT TCACTGAACC GGGTACTGGT TGTAAAAAAA
ACAACTGACC CGGAAAAAAA GAGTCTGATG GAAAATACCG CGGATGAAGA TCAAATACCC
GAAGAAGTAC AAAACTGA
 
Protein sequence
MLNFYKVFKN NNAYLLLLFY CSIAGLLIKF EQDYSLQNLL SRGIELRAGV SQRLSDIYRY 
LQLNDENEKL ALQNSVLLAE IIEQGSVLRD SASINRTARF IDSSPISFIH ARIVERRFNT
NENLLIINAG IKQGVEVDMA VMTPEGLVGR VIQVSNNYAK VMPVIHAEFS VSVVSDSNST
QGILSWNGKQ EQLAQMDYVP LSSSIGVNEK IHTADFSTFA IRGIPVGQVL NVEPDQKFYR
VDVRLGADFS SLNRVLVVKK TTDPEKKSLM ENTADEDQIP EEVQN