Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1803 |
Symbol | |
ID | 6375490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1951164 |
End bp | 1952021 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642684296 |
Product | rod shape-determining protein MreC |
Protein accession | YP_001960202 |
Protein GI | 189500732 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1792] Cell shape-determining protein |
TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGAACT TTTATAAAGT ATTCAAGAAT AACAACGCCT ATCTGCTTCT GCTTTTCTAT TGCAGTATAG CAGGCCTTCT CATCAAGTTT GAGCAGGACT ATTCTCTACA AAATCTTCTT TCCAGAGGGA TTGAATTGAG AGCGGGAGTG TCTCAGCGGC TCAGCGATAT ATATCGCTAC CTCCAACTCA ACGATGAAAA TGAAAAACTG GCACTGCAAA ATTCCGTACT GCTCGCAGAA ATTATTGAAC AGGGATCCGT ACTGAGGGAT TCAGCCAGTA TCAACCGTAC CGCTCGTTTT ATCGACAGCA GCCCGATCAG CTTTATCCAT GCAAGGATAG TGGAAAGAAG ATTCAATACC AATGAAAACC TGCTGATCAT CAACGCAGGT ATTAAGCAGG GGGTTGAGGT TGACATGGCC GTCATGACTC CCGAAGGACT GGTAGGAAGA GTCATTCAGG TTTCGAATAA TTACGCGAAG GTCATGCCGG TTATCCACGC GGAGTTCAGT GTCAGTGTGG TCTCTGACAG CAACAGCACA CAAGGAATTC TGAGCTGGAA CGGAAAGCAG GAACAGCTTG CTCAGATGGA CTATGTCCCG TTGAGCAGCT CAATAGGAGT CAATGAAAAA ATCCACACGG CAGATTTCAG TACCTTTGCC ATCAGAGGCA TTCCTGTCGG GCAAGTGCTC AATGTGGAAC CTGATCAAAA GTTTTACCGG GTAGATGTCC GGCTCGGCGC TGACTTCTCT TCACTGAACC GGGTACTGGT TGTAAAAAAA ACAACTGACC CGGAAAAAAA GAGTCTGATG GAAAATACCG CGGATGAAGA TCAAATACCC GAAGAAGTAC AAAACTGA
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Protein sequence | MLNFYKVFKN NNAYLLLLFY CSIAGLLIKF EQDYSLQNLL SRGIELRAGV SQRLSDIYRY LQLNDENEKL ALQNSVLLAE IIEQGSVLRD SASINRTARF IDSSPISFIH ARIVERRFNT NENLLIINAG IKQGVEVDMA VMTPEGLVGR VIQVSNNYAK VMPVIHAEFS VSVVSDSNST QGILSWNGKQ EQLAQMDYVP LSSSIGVNEK IHTADFSTFA IRGIPVGQVL NVEPDQKFYR VDVRLGADFS SLNRVLVVKK TTDPEKKSLM ENTADEDQIP EEVQN
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