Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1716 |
Symbol | |
ID | 6375403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1858120 |
End bp | 1859859 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642684209 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001960115 |
Protein GI | 189500645 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0300181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTGTT CATTCAATCA TGTAAAAAAA CAGCTCATGA GATCCGATAC CATAAAAAAA GGGTTTGAAA AAGCCCCCCA CAGAAGCCTT CTGAAGGCTA CAGGCGCTCT ATCGTCAAAC GAAGACTTCA ACAAACCGTT TATCGGCATC TGCAACTCGT TTATAGAGCT CATACCCGGT CATGCCCATC TTCAGAAACT GGGACAGATC GCCAAGGATG AAATCAGAAA AGCCGGAGGC GTTCCCTTTG AATTCAATAC CATAGGTGTG TGTGACGGTA TCGCGATGGG GCATCTTGGC ATGCGTTACT CCCTGGCAAG CAGAGAGCTG ATCGCTGACA GTGTCGAGAC CGTAGCACAG GCACACCGCC TTGACGGCCT TGTCTGTATT CCCAATTGCG ATAAAATAAC GCCGGGAATG ATGATGGCCG CCGTCCGCAT GAACATTCCG GTTATTTTTG TTTCAGGTGG ACCGATGAAA AAAGGCCGCA CCCCTTCCGG GGAAACAGTT GACCTCATTT CGGTTTTTGA AGCTGTCGGC CGTCACAGTA CAGGGGCGAT AAGCGAAGAG GAACTTGGCG TCATAGAAGA CCATGCCTGC CCCACCTGCG GTTCCTGCTC CGGGATGTTC ACGGCAAACT CCATGAACTG CCTTTGTGAG GCGCTCGGTT TCGCCCTTCC GGGAAACGGA ACAATACCTG CCGTAGACCC CAGACGACTG GAACTGGTCA GAGAGGCTTC CCGGCGCATC ATCGATCTGG TTGAAAAGGA TACTAAACCA CGGGATATTC TCTCCCGGGA GTCATTACTC AACGCCTTTG CTCTCGACTT CGCGATGGGC GGCAGCACGA ACACCATCCT CCATACACTG GCCGTTGCCA ATGAAGGCGA GGTTGTGTTC GATTTTTCCG AACTCAATGA TCTTTCCGCA AAAACACCCT ATATCTGCAA GGTCAGTCCT GCCACACAGA ATGTTCATAT TGAGGATGTC GACCGGGCCG GAGGTGTTTC CGCGATCTTG AAGGAACTTT CCAGAATCGA CGGTCTGCTC GACCTGACGA GACCTACCGT CACAGGAAAA ACCCTCGGGG AAAACATCGA GCAGGCCATT ATTACTGACA GCTCTGTCAT CCGGACCGTT GCATCCCCTT ATGCCACGAC CGGCGGCCTC GCGGTTCTTT ACGGCAATCT TGCTCCCGAA GGAGCTGTGG TAAAAACCGG TGCCGTCAGT GAATCGATGA TGAACCATAC CGGCCCCGCA AAGGTCTATG AGTGCCAGGA TGACGCCCTG ACAGGCATCA TGGAGGGAGA TGTCGTTGCC GGCGACGTCG TGGTCATCCG GTATGAAGGA CCAAAGGGCG GCCCCGGAAT GCCCGAAATG CTCTCCCCTA CCAGCGCGAT CATGGGTCGG GGCCTCGGAG AGTCTGTCGC GCTTCTGACC GACGGCCGTT TCTCGGGGGG GTCAAGGGGG GCATGTGTCG GTCATGTATC TCCTGAAGCT GCAGAAAGAG GACCGATTGC GGCTGTCCGG AACGGAGATA TGATCACCAT CGATATCCCG AACAGAACCA TGTCTGTCGA TCTCCCGGAT GCCGCCATTA AAGAAAGACT TGCGCAAGTA CCGCAATTCG TTCCGAAAAT CACTACGGGC TACCTGTCAA GGTACGCACA AATGGTTACT TCGGCCAATA CCGGCGCGAT ATTGCAAAAC CCGGTCTGTA AAAACAATAA ACAACGATAA
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Protein sequence | MHCSFNHVKK QLMRSDTIKK GFEKAPHRSL LKATGALSSN EDFNKPFIGI CNSFIELIPG HAHLQKLGQI AKDEIRKAGG VPFEFNTIGV CDGIAMGHLG MRYSLASREL IADSVETVAQ AHRLDGLVCI PNCDKITPGM MMAAVRMNIP VIFVSGGPMK KGRTPSGETV DLISVFEAVG RHSTGAISEE ELGVIEDHAC PTCGSCSGMF TANSMNCLCE ALGFALPGNG TIPAVDPRRL ELVREASRRI IDLVEKDTKP RDILSRESLL NAFALDFAMG GSTNTILHTL AVANEGEVVF DFSELNDLSA KTPYICKVSP ATQNVHIEDV DRAGGVSAIL KELSRIDGLL DLTRPTVTGK TLGENIEQAI ITDSSVIRTV ASPYATTGGL AVLYGNLAPE GAVVKTGAVS ESMMNHTGPA KVYECQDDAL TGIMEGDVVA GDVVVIRYEG PKGGPGMPEM LSPTSAIMGR GLGESVALLT DGRFSGGSRG ACVGHVSPEA AERGPIAAVR NGDMITIDIP NRTMSVDLPD AAIKERLAQV PQFVPKITTG YLSRYAQMVT SANTGAILQN PVCKNNKQR
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