Gene Cphamn1_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1690 
Symbol 
ID6375377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1829890 
End bp1830444 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content49% 
IMG OID642684184 
ProductNUDIX hydrolase 
Protein accessionYP_001960090 
Protein GI189500620 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000764223 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACATCT ATAAATATTG CCCCTCTTGC GGCACCCCGC TGAAAACAGC GACAATAGAA 
AATCGCACAA GGAAAACCTG TCCATCCTGT TCCTGGATCC ACTATGAAAA CCCGCTGCCT
GTAGCTTTGG CGTATACAGT AAACCAGTCC GGGAAACTGC TCGTTGTCAG GCGAGCCCAT
CCTCCCGCCT ATAATGCATG GGCTCTTCCC GGTGGGTTTA TCGAGTCCGG AGAAACTCCA
CAGGAGGGTT GTCTGCGGGA ACTGCGGGAG GAAACGTCAC TGAACGGCAG AATCGACCGT
CTGATCGGCG CCTACCATCG GGAATCGGAA ATGTACGGTT CTCTGCTTGC TGTGGCTTAT
AAGGTGATTG TCAGTGAGGA AACACTTCAG ATAAACCATG AACTCTACGA AGCAGATTTT
TATCCCTTTG AGGAGATACC CAGGATAACC ATTCCGCTGC ATCAAAAAGT TATACATGAT
GCCCGGGATC ATGAGTCTCA AAAATCTGAG GAAAACATCC CTTCCTTTCC TGTTCGTTCC
GGAAGAATCA CGTAA
 
Protein sequence
MNIYKYCPSC GTPLKTATIE NRTRKTCPSC SWIHYENPLP VALAYTVNQS GKLLVVRRAH 
PPAYNAWALP GGFIESGETP QEGCLRELRE ETSLNGRIDR LIGAYHRESE MYGSLLAVAY
KVIVSEETLQ INHELYEADF YPFEEIPRIT IPLHQKVIHD ARDHESQKSE ENIPSFPVRS
GRIT