Gene Cphamn1_1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1689 
Symbol 
ID6375376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1829165 
End bp1829635 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content44% 
IMG OID642684183 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001960089 
Protein GI189500619 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000694892 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAGTAC TGGAACCAGG AACACCGGCT CCGCCTTTTG AGTCAATTGA CCAGAATGGA 
AAAACCGTTA CCCTTGAGGA GTACAGGGGA AGGAAAGTCA TACTCTATTT TTATCCGAAA
GACGATACGC CGGGATGTAC CAAAGAGGCT TGTGCATTTA GAGACAATTT CCCTAAGTTT
AAAAAGATAG GGGTTGAGGT GCTTGGGGTC AGTATTGACA GTGAAAAGCG ACATAAAAAA
TTTGTCGACA AGTATGAACT TCCGTTCAGG CTTGTTGTTG ATGAAGACAA GAAAATAGTG
CAGGATTATG GAGTGTGGAG GTTGAAAAAA TTTATGGGCA GGGAATATAT GGGCACTGCC
AGGGTCACCT ATCTTATAGA TGAGCATGGT AGTATCCAGC ATGTGTGGCC GAAAGTCAAG
CCTGCGGATC ATGCCCTTGA ACTGCTTGAA TATATTGAAA ATGCCGGATA G
 
Protein sequence
MEVLEPGTPA PPFESIDQNG KTVTLEEYRG RKVILYFYPK DDTPGCTKEA CAFRDNFPKF 
KKIGVEVLGV SIDSEKRHKK FVDKYELPFR LVVDEDKKIV QDYGVWRLKK FMGREYMGTA
RVTYLIDEHG SIQHVWPKVK PADHALELLE YIENAG