Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1675 |
Symbol | |
ID | 6375361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1811539 |
End bp | 1813608 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642684169 |
Product | hypothetical protein |
Protein accession | YP_001960075 |
Protein GI | 189500605 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4930] Predicted ATP-dependent Lon-type protease |
TIGRFAM ID | [TIGR02653] conserved hypothetical protein [TIGR02688] conserved hypothetical protein TIGR02688 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.404714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000649266 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGAAC TTGACCAGAA AATCAACACA CACTTCCCGG GACTCGTTGT CCGCAAGGAT CTCGTCAAGA CGGTCAAGGG CAACGCCATC GTTCCCTCCT ACGTATTGGA ATACTTGCTG GGGCAGTATT GCGCCACCAG CGATGAGCCG ACCATCCAGA CCGGTATCGA GACGGTCAAG GAGATCCTGC GCAAACATTA CGTGCATCGC AACGAGGCGG GTCTGGTTCG CTCGAACATC AAGGAGAAAG GGCGTTACAA GGTCATCGAC AAGATTGGCG TGGCCTTGAA CGACAAGGCC GACGTCTACG AAGCGGAGTT TTCCAACCTC GGCATCAAGA AAGTGCTGGT CGACTCGGGT ACGGTCAAGA CCCACCCCAA GTTGCTGGTC AGCGGCGTGT GGTGCATTGC CGACATCGAA TATGAATTCA CCGAGGACAA GAACGCCAGC CCCTGGATCT TGTCGACCCT CAAGCCCATT CAACTTTCTC AGTTTGATTT TGACAGCTAC CTTGAAGCCC GCAAACAGCT CACCACCGAT GAATGGATCG ATTTACTGAT ACAGAGCATC GGTTTCAACC CCGAGATGTT CGGCAAGCGC AGCAAATTGA CCCAGTTGAT CCGCCTGATT CCGTTTTGCG AGCGCAACTA CAACTTGATC GAACTTGGCC CGAAGGGAAC CGGCAAATCT CACATCTACT CGGAGTTCTC GCCTCACGGC ATCCTGATCT CCGGCGGCGA GATCACAGTT CCCAAGCTCT TCGTGAACAA CTCTTCCGGA AAGATCGGCC TGGTCGGTTA CTGGGACTGT GTTGCCTTCG ACGAGTTTGC CGGAAAGCAA AAACGCGTCG ACAAGGCCCT GGTCGACATC ATGAAGAACT ACATGGCCAA CAAGTCCTTC TCGCGGGGCG TCGAGACGCT GGGCGCGGAG GCGTCCATGG TTTTCGTGGG CAACACTCAG CACACCGTGC CCTACATGCT CAAACACTCG GATCTTTTTT GCGAGCTGCC CGAAAAGTTC TACGACTCCG CATTTCTTGA CCGTATCCAT TTCTATATCC CGGGCTGGGA GGTCGACATC ATCCGGGGCG AGATGTTTTC CAACGGCTAC GGCTTCGTGG TGGACTACCT GGCCGAGATC CTTCGCTCGC TGCGCAATCA CGATTACTCG GACCGCTACA AGGAGCACTT CTCCCTCTCC TCGGATATCT CGACGCGGGA CCGCGATGGA ATCAACAAGA CATTCTCCGG CCTGATGAAG ATCCTCTTTC CGCATGACGG GGCGACCAAG GAAGAGATTG AGGAACTGCT GCGGTTCGCG ATTGAGGGCC GCAAGCGCGT TAAAGACCAA CTGATGCGCA TTGATTCCAC CTACGGCAAC GTCCGCTTTA CCTATCAAGA CAGTGATGGC CAGGCCAAGC CTGTCACCAC GCTCGAAGAA GAGGAATACC CCGGCTACTA TCACAAGACC ATCGCGGAGG GCGAAGACGG GGAAATCTTA GAAGCTGCGC AACCGGGCTC ACCCCAAGGT CCATCCGAAC CACTGGCACC GGCCGAGCCC GCCCTCAAAG AAAAGCACCT CACATTCCAG GAGAACCAGA AGGGCCTCTC CTTCGATACG CTGCTCGGCC CTTATCTCAA GGGCGCAACT GCGATCACGG CCACTGATCC GTACCTCCGC CTGTTTTACC AGATGCGCAA CTTCATGGAA TTCCTGGAGA CGGTGGTCAA GCACAAGGCT CCGGATGAGG AAGTATCCGT GCATCTGGTG ACGACGGAAG ACGAGTTCAA AGGCGAACAG CAAAAGGAAA ACTTCGAGAA GATGAAGGAG TCCGCCAGTG CGGTGGGCGT GAACTTCACC TGGGAGTTCG ACGGCACCGG CACGATCCAC GCCCGCCATA TCGTGACCGA CCACGGCTGG AAAATCTCCC TGGATCGCGG TCTCGATATC TTCCAACACT ACGAGATGAA CGATGCCTTT ACCTTCGCCA ATCGACTGCA GCAGTACCGC CCATGCAAGG CGTTCGAGGT GACGTTCATT AAACACAAGC GGGAAGCTGA GGGGGAATAA
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Protein sequence | MNELDQKINT HFPGLVVRKD LVKTVKGNAI VPSYVLEYLL GQYCATSDEP TIQTGIETVK EILRKHYVHR NEAGLVRSNI KEKGRYKVID KIGVALNDKA DVYEAEFSNL GIKKVLVDSG TVKTHPKLLV SGVWCIADIE YEFTEDKNAS PWILSTLKPI QLSQFDFDSY LEARKQLTTD EWIDLLIQSI GFNPEMFGKR SKLTQLIRLI PFCERNYNLI ELGPKGTGKS HIYSEFSPHG ILISGGEITV PKLFVNNSSG KIGLVGYWDC VAFDEFAGKQ KRVDKALVDI MKNYMANKSF SRGVETLGAE ASMVFVGNTQ HTVPYMLKHS DLFCELPEKF YDSAFLDRIH FYIPGWEVDI IRGEMFSNGY GFVVDYLAEI LRSLRNHDYS DRYKEHFSLS SDISTRDRDG INKTFSGLMK ILFPHDGATK EEIEELLRFA IEGRKRVKDQ LMRIDSTYGN VRFTYQDSDG QAKPVTTLEE EEYPGYYHKT IAEGEDGEIL EAAQPGSPQG PSEPLAPAEP ALKEKHLTFQ ENQKGLSFDT LLGPYLKGAT AITATDPYLR LFYQMRNFME FLETVVKHKA PDEEVSVHLV TTEDEFKGEQ QKENFEKMKE SASAVGVNFT WEFDGTGTIH ARHIVTDHGW KISLDRGLDI FQHYEMNDAF TFANRLQQYR PCKAFEVTFI KHKREAEGE
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