Gene Cphamn1_1614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1614 
Symbol 
ID6375294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1738641 
End bp1740341 
Gene Length1701 bp 
Protein Length566 aa 
Translation table11 
GC content52% 
IMG OID642684103 
Productsodium/hydrogen exchanger 
Protein accessionYP_001960015 
Protein GI189500545 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4651] Kef-type K+ transport system, predicted NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGACC TTTCGTTCAT TCATACCGTC CCGTTTTACG AGATCACTGC TCTCCTGGTG 
CTTGCCGCGA TGATAGGCCT TTTTAGCCTG CTGCTTCGCC AACCGTTGAT CGTCAGCCTC
ATAGCAGTCG GAGTCCTTGC CGGGCCATCT GCGCTCGACA TCGTTCAGTC GCATGAGTAC
ATTGAGCTGA TGGGAGAACT CGGCATAGCC CTGCTGCTCT TTCTCGTGGG GTTGAAGCTC
GATCTCAATC TTGTCAGATC GCTCGGCCTT GTTTCTCTGG CAACCGGTCT CGGACAGGTT
CTGTTTACAG CGGTGATGGG GTTTTTCATT GCAGTTGCTA TCGGCCTCGA TGTCCGGACA
TCAATCTATG TCGCGGTCGC TCTGACCTTC TCCAGCACCA TCATCATTGT CAAGCTGCTT
TCGGATAAAA AGGAGGTTGA CTCACTGCAC GGTCGAATCG CGTTGGGATT CCTGATCGTG
CAGGACCTCG TCGTGGTTAT CGCCATGATG ACCCTCTCTG CTTTCGGTGC CGGCAGCGGC
AACACAGGAG AATACGAAGG GCTGCTGAAA GTCGGCTCGG TCATGCTCTA TGGAGGGATA
ATGCTGCTGT TTGTCAGTTT CTTTATCAGG TTTCTGGCAA ATCCGATTGT GAATCGTTTC
GCGCGGTCAC CGGAACTGCT GGTGACATTC GCGCTGGGCT GGGCCGCGCT TTTCGCGTCC
GCGGGTGATT TTTTCGGCTT CAGCAAGGAG CTCGGAGGAC TGCTTGCAGG CGTTTCACTT
GCCTCTACGC CTTTCAGGGA ATCGATCGTC GCAAAAATGT CTTCCCTTCG GGATTTCCTG
CTGCTGTTCT TTTTCATCTC GCTCGGCATG AACCTCGACA TGGGCCTTCT GGGAGCCCAG
GTCGGCCCGG CCCTGATCTT CTCACTGTTT GTGCTGATAG GAAACCCGCT TATCGTCATG
ATCATCATGG GAATTCTGGG CTACCGCAAA CGAACCGGTT TTCTCGCAGG CCTCACCGTC
GCTCAGATAA GCGAATTTTC TCTGATATTC ATGGCGATGG GCATGGATCT CGGACATGTA
GAACCCGAGG CAATGGGACT CGTGACACTC GTGGGGCTGC TCACCATAGC GCTCTCGGTC
TATATGATCA CCTATTCCCA TACCCTCTAC CGTTTCCTTG AACCGCTGCT GGGAGTGTTT
GAAAAAAAGA TTCCGGTGAG AGAAAGCAAT GAAAAACTTG AACAGATTGA ACACACTGAC
TATGACATCA TTCTTTTCGG GATGGGCAGA TATGGAAGCG CAGTGGTCCA CTATCTCAAA
CAGGACGGAT ACAGAATTCT TGCTGTCGAT TTCAATCCCG ACGAAGTCCG TCAATGGAAA
AAAAGAGGTT ACGACGCCAT TTACGGAGAC GCAAGCGATC AGGAATTTAT TGCAAGCCTG
CCATTGCAGG GTGTGAAATG GGTTGTGTCA GCCGTTTCAC AGCACGAACT TGGCCTTTCC
CGTGAAGACC CCCGAATGGT ACTGATTGAC GCCCTCAAAC ACACCGGTTT TACCGGCAGG
ATCGCCGTAT CGACCCAACG GCTACAGGAA AAGGAACAAC TGAAAGCAAA AGGAGCCGAT
ATTGTGTTCC TTCCGTTTTA CGATGCCGCC GAGCAGGCGG CGATACGCAT CAAAGAACGT
AGCGAAAAAA TCATCTTGTA A
 
Protein sequence
MSDLSFIHTV PFYEITALLV LAAMIGLFSL LLRQPLIVSL IAVGVLAGPS ALDIVQSHEY 
IELMGELGIA LLLFLVGLKL DLNLVRSLGL VSLATGLGQV LFTAVMGFFI AVAIGLDVRT
SIYVAVALTF SSTIIIVKLL SDKKEVDSLH GRIALGFLIV QDLVVVIAMM TLSAFGAGSG
NTGEYEGLLK VGSVMLYGGI MLLFVSFFIR FLANPIVNRF ARSPELLVTF ALGWAALFAS
AGDFFGFSKE LGGLLAGVSL ASTPFRESIV AKMSSLRDFL LLFFFISLGM NLDMGLLGAQ
VGPALIFSLF VLIGNPLIVM IIMGILGYRK RTGFLAGLTV AQISEFSLIF MAMGMDLGHV
EPEAMGLVTL VGLLTIALSV YMITYSHTLY RFLEPLLGVF EKKIPVRESN EKLEQIEHTD
YDIILFGMGR YGSAVVHYLK QDGYRILAVD FNPDEVRQWK KRGYDAIYGD ASDQEFIASL
PLQGVKWVVS AVSQHELGLS REDPRMVLID ALKHTGFTGR IAVSTQRLQE KEQLKAKGAD
IVFLPFYDAA EQAAIRIKER SEKIIL