Gene Cphamn1_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1602 
Symbol 
ID6375280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1729073 
End bp1729693 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content49% 
IMG OID642684090 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_001960004 
Protein GI189500534 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGT ATTTCAGGGA TATAGGTACC AGTGTAACAA GCATTCTGAC AGGAATGGGC 
ATTACCTTGC GTCATTTTTT CAATGCCGTC AAGAGAAAAG GGGATGCTGG TATCGATGAA
GAGAACTATT TCAATCAGGT TGACGGTCTG GTCACTCTTC AGTATCCGAG AGAGGCGGTC
CCCACCCCTG AAATAGGCCG CTATCGTCTC TATAATGAAA TTGATGACTG TATAGGATGC
GGTCAGTGTG TGAGGGCCTG TCCTATCGAC TGTATCATGA TGGAAACCAT AAAGGTCACC
AAGGATGACC TTGCGGTCTG CGGAAAGACT TCAGGCGGAC AACAGAAAAA ATTCTGGGTG
CCTGTGTTTG ATATTGATGT GGCGCAGTGT ATGACCTGTG GCATCTGTTC GGCTGTCTGT
CCGACAGAAT GCCTCTACCA TACGCAGGTC AGTGATTTCT CTGAATTCCG TCGAGAGAAC
ATGATCTACC ACTTCGGCAA CCTGACGAAG CTGGAAGCTG AAGCGAAAAG AAAGAAGCTT
GAAGAAGAAA AAAAGGCAGC CCCGGCGCCT AAACCGAAAC CTGCGCCCAA AGCAGCCCCG
GCGAAAAACG CTACAACGTG A
 
Protein sequence
MSEYFRDIGT SVTSILTGMG ITLRHFFNAV KRKGDAGIDE ENYFNQVDGL VTLQYPREAV 
PTPEIGRYRL YNEIDDCIGC GQCVRACPID CIMMETIKVT KDDLAVCGKT SGGQQKKFWV
PVFDIDVAQC MTCGICSAVC PTECLYHTQV SDFSEFRREN MIYHFGNLTK LEAEAKRKKL
EEEKKAAPAP KPKPAPKAAP AKNATT