| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1592 |
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| Symbol | |
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| ID | 6375270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1716422 |
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| End bp | 1718140 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642684080 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_001959994 |
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| Protein GI | 189500524 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.663154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAA AAATAGTTGT AGATCCGATT CCCAGAATTG AGGGACATTT ACGGATAGAA
GCAAAACTCG GCGAAAACAA CGTTATTGAA GATGCATTCA GTAGCGGCAC CATGTGGCGC
GGTATTGAAA TTATTCTCAA GGGAAGGGAT CCACGTGATG CCTGGGCATT TGCAGAGCGT
ATCTGTGGTG TCTGCACCAC TGTTCATGCG CTTGCATCGG TCAGGTGTGT GGAGGACGCT
CTGGGTATAG AGATACCCGA GAACGCAAGG ATCATCAGAA ACCTTATGAA CGCTACCCAG
CAGACTCAGG ATCATCTGGT GCATTTCTAT CATCTCCATG CTCTGGACTG GGTGGATGTC
GTGAGCGCTC TCAAGGCTGA CCCGAAAGCA GCTTCACGAA TTGCACAGAG CCTCTCCTCC
TGGCCCAAAT CATCACCGGG TTATTTCAAG GACCTGCAAC AGAAACTTGT GGGTTTTGTG
GAAAGCGGAC AGCTTGGCAT TTTTGCCAAC GGGTACTGGG GACATCCCGC CTACAAACTG
CCGCCTGAAG TCAATCTCAT CGCGGTAGCT CATTATCTCG AGGCTCTTGA TTTTCAGAAA
GAAATCGTCA AGATTCATAC TGTGTTCGGA GGAAAGAACC CTCATCCTAA TTATCTGGTC
GGCGGTATGG CCTGTGCGCT CGATCCGGAT AGGGACACAG CGATCAATAT CGAGACCCTC
AGTATGGTGA AGAAAATCAT CGAGGATACC CAGACCTTTA TAGAGCAGGT GTATATTCCG
GATCTGATCG CTATTGCCGG TTTTTACAAG GATTGGGGAT ACGGGGGCGG ACTTGGCAAC
TACCTCTGTT ACGGCGATTT TCCTGAAAAA AGTATCGATG ACGCAGCTTC GCTGCTCTGG
CCGAGAGGAG CTATACTCAA CAAGGATCTT TCGACAATAC ATGATGTCGA TCCTCGTGAT
CTCAGTCAGG TTACCGAAGA GGTCAGCCAC AGCTGGTATA CCTACAGCAA TGGTGATGAA
AAAGGCCTGC ACCCTTGGGA GGGTGAGACA AAACCGGAAT ACACCGGACC GAAACCACCG
TTCGAATATC TGGACACGGA GAAGAAATAC AGCTGGCTGA AAACACCTCG CTGGAAGAAT
AATCCTATGG AGGTGGGTCC GCTTGCAAGG GTTCTGCTTG CTTACGCAAA GGGCGACCCG
ATGATCACGG ATACCGTCAA TATGGTACTT GGCAAGCTTG AGGTAGGACC AGAGGCGCTA
TTTTCAACAT TGGGAAGAAC AGCCGCCCGG GGTATAGAGT GCCTGCAGAC CGCAGGTTTT
ATGATGCATT ACTATGATCA GCTTATTGAC AATATCAAGA CAGGCGATTT ACGTACGGCA
AACACAGAAC TGTGGGATCC TTCCCGATGG CCGAAAGAAG CCAAGGGGTT TGGGTATACT
GAGGCTCCGC GCGGCGCGCT TGGTCACTGG ATTCATATCA GGGACGGCAA GATAGAGGAC
TACCAGATTG TTGTTCCTTC AACATGGAAC GCTTCGCCCC GTGATGCAAA TGGTGCGGTC
GGTGCCTACG AATCGGCGCT CAAAGGCACT CCCATGGTGG ATCCTGAACA GCCGCTCGAA
ATACTCAGAA CCATTCATTC TTTTGATCCT TGTCTTGCCT GCGCTTCTCA TGTTTTTGAC
ATGAACGGCA ACGAGATAAC AAAGGTCACC ATCGTTTAA
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| Protein sequence | MAKKIVVDPI PRIEGHLRIE AKLGENNVIE DAFSSGTMWR GIEIILKGRD PRDAWAFAER
ICGVCTTVHA LASVRCVEDA LGIEIPENAR IIRNLMNATQ QTQDHLVHFY HLHALDWVDV
VSALKADPKA ASRIAQSLSS WPKSSPGYFK DLQQKLVGFV ESGQLGIFAN GYWGHPAYKL
PPEVNLIAVA HYLEALDFQK EIVKIHTVFG GKNPHPNYLV GGMACALDPD RDTAINIETL
SMVKKIIEDT QTFIEQVYIP DLIAIAGFYK DWGYGGGLGN YLCYGDFPEK SIDDAASLLW
PRGAILNKDL STIHDVDPRD LSQVTEEVSH SWYTYSNGDE KGLHPWEGET KPEYTGPKPP
FEYLDTEKKY SWLKTPRWKN NPMEVGPLAR VLLAYAKGDP MITDTVNMVL GKLEVGPEAL
FSTLGRTAAR GIECLQTAGF MMHYYDQLID NIKTGDLRTA NTELWDPSRW PKEAKGFGYT
EAPRGALGHW IHIRDGKIED YQIVVPSTWN ASPRDANGAV GAYESALKGT PMVDPEQPLE
ILRTIHSFDP CLACASHVFD MNGNEITKVT IV
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