Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1549 |
Symbol | |
ID | 6375227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1672300 |
End bp | 1672890 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642684040 |
Product | hypothetical protein |
Protein accession | YP_001959954 |
Protein GI | 189500484 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000121891 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0629521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAT CGGCGTGGTT AGATCCAAAG TTGATTGTTC CAGCCATTGG AGTTGTTCTT GCATCAGTGA TAGTTCCGAT ATTGCTCCAT ACCCTCAAGG GAAGACGAGA ACGGGAAGAC AAGCTGTTAG AAATAAGAAC AAAAGCATAT ACAGAGTACT TCAGGAGATT TGAGGAGGCT GCGCGTGGAG TTGGAGTTGA TTATGAGCAA TTCTCAAAAG TCACGTTAAA GAATGCATTC CGCGAGTTAC TAGAATCAGA TAACTCACCC GATGCAATCA TTAAGTTCCA AGATGAGGTT GGCAAGTTTC CCCATCAAAT CCAGGACTCT CATAGAAAGG CAACAGAAGA AATTACAACC TTAAAAGTTC TTGGTTCATC TAAGTTGCTG GAACTTACAA CTGAGTTTGA GGCGCTGAAT CAAGAAATAT TAGAAATGTC GTCTAAGTGG CTTAATGAAA TGCAGCAGGC GCTTGCCGTG CCAGACTTTG ACGCACCGAT AGCAAAGAAG ATGAAAGAAA AAGGGATGAA AGCCAAAGAG CTCAAAGAAC AAATAATCAA GCAAATGAGG GTGGAGTTAA AGCTTGATTA A
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Protein sequence | MTASAWLDPK LIVPAIGVVL ASVIVPILLH TLKGRRERED KLLEIRTKAY TEYFRRFEEA ARGVGVDYEQ FSKVTLKNAF RELLESDNSP DAIIKFQDEV GKFPHQIQDS HRKATEEITT LKVLGSSKLL ELTTEFEALN QEILEMSSKW LNEMQQALAV PDFDAPIAKK MKEKGMKAKE LKEQIIKQMR VELKLD
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