Gene Cphamn1_1526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1526 
Symbol 
ID6375204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1649745 
End bp1651022 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content50% 
IMG OID642684019 
Productadenylosuccinate lyase 
Protein accessionYP_001959933 
Protein GI189500463 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCA TCTGGACGGA CGAAGCAAAG TTCGAACGCT GGCTGCAACT TGAAATCGCG 
GCTGTCGAGG CTCGGGCTGA AGCAGGAGTC GTACCCAGGG AGGCCTTGCA GACGATACAG
GAAAAAGCCA CATTCAACGT CGATGAAATT CTTGAAATCG AAAAGGAAAC AAAGCACGAT
GTCATAGCCT TCCTGACCAA TGTCAACCAG TACGTGGGGC CGCAATCACG GTATATTCAT
GAAGGCCTGA CCTCATCAGA TGTGGGAGAC ACCTGTCTCG CCATGCAGAT GCGCGACGCC
GGCAGGATTC TTCTCAAGGA TGTCGAATCC CTGATCGACG TACTGGCCGA AAGAGCGGTT
GAATTCAAGT ATACCCTTGA AATGGGGAGA ACACACGGCA TTCATGCCGA GCCGACAACG
TTCGGCTTGA AGCTGCTTCT CTGGCATCAG GAAATGCTTC GGAACCTTGA CAGATTGAAA
AGAGCTGTTG ACAATGTTTC GTTCGGCAAA ATATCAGGCG CCGTTGGAAC ATATCAGCAC
CTTTCTCCGG AAATCGAAGC CGTTGTCTGC AAAAAACTCG GACTTTCTCC GGCACCTGTT
TCAACACAGA TACTGCAGCG TGACCGTCAC GCCGAGTTCC TCACAACCCT TGCTATCATC
GCTTCATCAA TAGAGAAATT TTCAGTTGAG TTCCGGCACC TGCAGCGAAC AGAAGTGCGG
GAAACCGAAG AATTTTTCAG CAAGGGACAG AAAGGCAGCT CCGCCATGCC GCACAAACGT
AACCCGATCA CTTTCGAACG CCTTACCGGT CTTGCCCGTA TAGTTCGTTC AAACTCCATA
GCGGCAATGG AAAATGTCGC TCTCTGGCAT GAACGGGATA TTTCACATTC ATCGGTCGAG
AGGGTTATCA TGCCTGATTC CACAATGGCT CTCTGCTACA TGCTTCGCAC ATTTACGGAT
ACCCTGAAAC ATCTTCTTGT CTATCCGGAA AGAATGCAGG AAAACTTCAA CACCTCCTAC
GGCCTTACGC TTTCTCAAAC CCTGCTTCTC GCACTGACAG GAAAAGGGCT TACCCGTGAA
AATGCATATA AACTCGTGCA ACGCAATGCC ATGAAAAGCT GGGAACACAA AGTGCAGCTG
AAAGAACACG TCCTGCAGGA TAAGGAAATT CTCGACATTG TTTCCGCTGA AGAAATCGAG
CAGCTCTTCT CATCGGAAAA CATCCTGAAC AAGCTCAGAA AAAGCGTTGA CACCATCTTT
GCCCGTAACG GGCTCTGA
 
Protein sequence
MEAIWTDEAK FERWLQLEIA AVEARAEAGV VPREALQTIQ EKATFNVDEI LEIEKETKHD 
VIAFLTNVNQ YVGPQSRYIH EGLTSSDVGD TCLAMQMRDA GRILLKDVES LIDVLAERAV
EFKYTLEMGR THGIHAEPTT FGLKLLLWHQ EMLRNLDRLK RAVDNVSFGK ISGAVGTYQH
LSPEIEAVVC KKLGLSPAPV STQILQRDRH AEFLTTLAII ASSIEKFSVE FRHLQRTEVR
ETEEFFSKGQ KGSSAMPHKR NPITFERLTG LARIVRSNSI AAMENVALWH ERDISHSSVE
RVIMPDSTMA LCYMLRTFTD TLKHLLVYPE RMQENFNTSY GLTLSQTLLL ALTGKGLTRE
NAYKLVQRNA MKSWEHKVQL KEHVLQDKEI LDIVSAEEIE QLFSSENILN KLRKSVDTIF
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