Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1524 |
Symbol | |
ID | 6375202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1646882 |
End bp | 1648159 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642684017 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001959931 |
Protein GI | 189500461 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAT CACCTTTGGC AATATTGTTT TTGACAGTAC TGCTTGACCT TATCGGGTTC GGTATTGTCC TGCCTCTTCT TCCTACCTAC GCCAAAGATC TCGGAGCGAG CCCTTTGATG ATCGGCTTTA TTGCTGCCAC CTATTCCGGA ATGCAGTTTC TTTTTTCACC CATCTGGGGA AGGTTGAGCG ACTTCATCGG ACGAAGACCG GTGATGCTGG TCAGTATCTT TATGGCCGCA GTTTCCTATC TTTTTTTCGC CCATGCGTCA ACCATCCCGT TACTGATACT GGCACGTGCT CTTTCCGGCA TCGGATCGGC GAACATCGCG GCTGCCCAGG CCTACATCAC CGACGTTACC GACAGCAAAA GCAGATCTAC CGCCATGGGG ATGCTCGGGG CCGCTTTTGG AATCGGTTTT ATTATCGGAC CGTTAATCGG CGGCTTTCTG AAGCACAATT TCGGCATTGA AATGGTCGGC TACGTCGCTT CCGCGCTGAT AGCTCTGGAC TTTATCCTTG CTGTTTTTTT CCTTACGGAA TCAAACAAAG ATGCGCAGAA AATCTCTCAC TTTCTCAAGA TTTCACTGGC ACGCACAGGC AAACCGATAC TGACCTCGAT GCAAGAGAAA TCAGCCGCCT ATTTTAAGGG TATCAGTAAC GCGCTAAGCC ACAAGCCCAT AGCACTGCTC ATGAGCGCCA ATTTTATTTT CACTTTTGGC ATCATCAACA TGCAGATAGC GGCCATTCTT CTGTGGAAAG AATATTTCAT GGCAACCGAC CAGCAGATAG GCTACCTATT CGCATACGTA GGTTTCATAT CGGTAGTTGT CCAGGGGGGC CTGATCGGAA AATTGAATAA GCGATTCGGT GAACACAAGC TTTTCCTCTT GGGGCATATC ATTACCTTTG TGGGTGTTTT TTTTATCCCG TTCATCCCTC CAACGACGCT GTTTACTCTT GGGCTGGGAA TCCTTCTGTT CTTCTCAATA GGAACAAGCC TCGTAAACCC GATCAACATT TCATTGATCT CCCTCTACAG CTACACCCAG AAACAGGGAC AGATCATGGG CTACGGACAG TCCGTCAATT CCCTTGCCCG GATATTAGGC CCGTTCAGCG GCAGCATTCT TTATGGAATG ATCCCTTCCA TGCCGTTTGT CGTGGCAGGG GTGCTCATGC TCGTCGGAAC AATAATTTCC CTTAGCTTGT TTAAATACGA CATAGAGGCT TTGGAGCCGG AACCCGAATC CTCGACTGAC CCGCAAACAG CTGAATAG
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Protein sequence | MKKSPLAILF LTVLLDLIGF GIVLPLLPTY AKDLGASPLM IGFIAATYSG MQFLFSPIWG RLSDFIGRRP VMLVSIFMAA VSYLFFAHAS TIPLLILARA LSGIGSANIA AAQAYITDVT DSKSRSTAMG MLGAAFGIGF IIGPLIGGFL KHNFGIEMVG YVASALIALD FILAVFFLTE SNKDAQKISH FLKISLARTG KPILTSMQEK SAAYFKGISN ALSHKPIALL MSANFIFTFG IINMQIAAIL LWKEYFMATD QQIGYLFAYV GFISVVVQGG LIGKLNKRFG EHKLFLLGHI ITFVGVFFIP FIPPTTLFTL GLGILLFFSI GTSLVNPINI SLISLYSYTQ KQGQIMGYGQ SVNSLARILG PFSGSILYGM IPSMPFVVAG VLMLVGTIIS LSLFKYDIEA LEPEPESSTD PQTAE
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