| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1425 |
|---|
| Symbol | |
|---|
| ID | 6375103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1548844 |
|---|
| End bp | 1549716 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642683920 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001959834 |
|---|
| Protein GI | 189500364 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.470267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC AAAAAGCCCT TATAGCGGGA GGCTCGGGAT ACCTGGGACG TTATGTCGCC
CAGGAGTTTA AAAACAGAGG CTACCATGTG AGAGTGCTGG TGCGCAATCC CGAAAAGATC
AAAACGACCG GCGAACACGG AGAACCGATC ATCCACGACC TTGTCGATGA GGTTATCACG
GGTGATGCGA CGAAACCGGA AACACTTTTG GGTATCTGCG ACGATATCGA TATCGTTTTC
TCTTCACTGG GGCTGACCAA ACCGGATTTC AAGCATACCA GCTTCGATAT CGATTACAGG
GGGAACAAGC GCATTCTTGA TCTGGCCATC AAAGCAAAGG TGAAAAAGTT CATCTACATT
TCGGTGTTCA ACGCCGAAAA GATGCTTGAC ATCTCGAACA TTCAGGCTCA TGAGCAGTTT
GCCGGGGAAT TGCGAAAATC AGGCATGGAG TATACGATCA TCCGACCAAC CGGCTATTTC
TCTGACATGC TCCAGTTCCT CAATCTTGCA AAAATGGGCA TAATGCCGAT CCTGGGAGAC
GGGGACAAGC GCTCTAACCC GATACATGCC GCAGATCTCG CAATGGTAGC GGCTGATGCC
GCTGAAGGAG ATGAACGGGA TATTGACGCC GGCGGACCTG ATATTTTTAC CTACAGAGAA
GTCGGGGAAC TCGCGGCATC TGTGACAGGA ACAAAACCGA TGCTTCTCTC TATTCCCCTT
TGGATCGGAG AAGGTTTGCT GACAGTATCA AGGCTGATCA ACAGGGACAT TGCCGATATC
TTTTCCTTTG CCCTTGCCGT CAGTAAACTT GACAGCGTTG CACCGCAACT CGGCACGCAT
CATCTTGCCG ACTTTTTTAA AGAGAATCTT TGA
|
|---|
| Protein sequence | MKKQKALIAG GSGYLGRYVA QEFKNRGYHV RVLVRNPEKI KTTGEHGEPI IHDLVDEVIT
GDATKPETLL GICDDIDIVF SSLGLTKPDF KHTSFDIDYR GNKRILDLAI KAKVKKFIYI
SVFNAEKMLD ISNIQAHEQF AGELRKSGME YTIIRPTGYF SDMLQFLNLA KMGIMPILGD
GDKRSNPIHA ADLAMVAADA AEGDERDIDA GGPDIFTYRE VGELAASVTG TKPMLLSIPL
WIGEGLLTVS RLINRDIADI FSFALAVSKL DSVAPQLGTH HLADFFKENL
|
|---|
| |