| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1291 |
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| Symbol | |
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| ID | 6374968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1403707 |
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| End bp | 1405056 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642683788 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001959703 |
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| Protein GI | 189500233 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0012852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.892865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGACA ATTTAAGCGA CAAGTTAGAG GCTTCTTTTA AAAAGCTTGC CGGACAGGCG
ACGATCAATG AAGTGAATAT CGGCATCGCC ATGCGTGATA TCAAACGTGC TCTGTTAAGC
GCTGACGTCA ACTATAAGGT CGCAAAGAAA TTCGTGGACG AAGTCAGGTC CAGGGCGTTG
GGTCAGGATG TGGTCAAAAG TGTTTCGCCT GCCCAGATGA TCGTCAAGAT AGTCAGTGAT
GAGCTGACCG AGATCATGGG TGGTGAGCAT AAGCCTTTGA ACCTCACAAC GAATAAACTG
CCTTCTGTTG TTATGGTTGC CGGCTTGCAG GGTTCGGGCA AGACGACTTT TTGCGCGAAG
CTGGCAAAGC GATTGAAGAA AAATGGTAAA CATCCATTGC TTGCCGCTGC CGATGTTTAT
CGTCCCGCTG CGGTTGAGCA GTTGAAAACG CTGGGAGAGC AGATCGAGGT ACCGGTGTTT
TCTCTCGAAG TCAAAGACGC CCTGAAAGTT GCGCTTGACG CGGTCGAGTC TGCGAGAAAT
AATGGAAACG ATGTTGTTAT TGTTGATACA GCCGGACGCC TGCAGGTCGA TGAGGGCATG
ATGGCGGAAG CAGAGGCGCT GAAAGATCAG TTGAAGCCGG AAGAACTGCT GTTCGTTGTT
GATGCCATGA TCGGTCAGGA GGCAGTCAAT ACGGCAAAGG TGTTTAACGA GCGCCTTGAT
TTTGACGGTG TTGTATTGAC CAAACTCGAT GGTGATGCGC GTGGTGGTTC GGCACTCTCT
ATCAAGCAGG TTGTCGACAA GCCGATCAAG TTTATGAGTG TCGGCGAGAA AGTCGATGAT
CTTGATCTGT TTTACCCTGA TCGTATGGCC CAGAGAATTC TCGGCATGGG CGATATTGTC
GGTTTCGTTG AAAAAGCCCA GGAGACGCTC GATCTCGAGA AAACGCAAAA GATGCAGTCA
CGGCTGCTGA AAAATGAATT TGATCTGGAT GATTTTTTTG AACAGCTTCA GCAATTGAAG
AAAATGGGTT CGATACAGGG TCTTGTGGAA ATGGTTCCCG GACTGAACAA AATGATCCCC
AAGCAGGATC TTGACGGTCT CGATTTCAAG CCTATTGAAG CAATCATATC CTCCATGACC
AAAGCGGAGA GAAATGCCCC TGAAATTATT AACGGAAGCC GCAGACAGAG AATCGCCAAA
GGAAGCGGAA CACGTGTTCA GGATGTGAAT ATGCTGCTTA AGCAGTTTAA AGAGATGAAA
AAGATGATGG GTTCGGTGAC CAAGATGACA AATTCAGGCC GCAAGATTCT TCCACAGAAT
CTTCCGCTTG AAAAACTTAT GAAACGATAA
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| Protein sequence | MFDNLSDKLE ASFKKLAGQA TINEVNIGIA MRDIKRALLS ADVNYKVAKK FVDEVRSRAL
GQDVVKSVSP AQMIVKIVSD ELTEIMGGEH KPLNLTTNKL PSVVMVAGLQ GSGKTTFCAK
LAKRLKKNGK HPLLAAADVY RPAAVEQLKT LGEQIEVPVF SLEVKDALKV ALDAVESARN
NGNDVVIVDT AGRLQVDEGM MAEAEALKDQ LKPEELLFVV DAMIGQEAVN TAKVFNERLD
FDGVVLTKLD GDARGGSALS IKQVVDKPIK FMSVGEKVDD LDLFYPDRMA QRILGMGDIV
GFVEKAQETL DLEKTQKMQS RLLKNEFDLD DFFEQLQQLK KMGSIQGLVE MVPGLNKMIP
KQDLDGLDFK PIEAIISSMT KAERNAPEII NGSRRQRIAK GSGTRVQDVN MLLKQFKEMK
KMMGSVTKMT NSGRKILPQN LPLEKLMKR
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