| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1269 |
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| Symbol | |
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| ID | 6374946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1378005 |
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| End bp | 1379315 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642683767 |
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| Product | phosphatidylserine decarboxylase-related |
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| Protein accession | YP_001959682 |
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| Protein GI | 189500212 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00492454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0230075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTTTAC CCGCTTTCGG GTATACGGCG GCGAAACAGT CAGCCCCTAA TGCAAACGAT
AAAGCAATTC CCTACAAGGT CGGTCAGTGG CAGCCCTCCG ACCAGAAGAT TCTGAATCAA
TGGGTGGAAG GCCTCGTCCG GGAAACCAAT GCCAACGGCC AACCTCTGGT GCCCGTAGTT
CAGGAACTCA AGAACCTGAT CGAAAGCGAC CCGGAACTTT TCATGCTCTT TATGCAAATG
TTCGAGCAGG TTCCAAGCAA CACCCCCAAG TACCAGAAAG ATCCCACCGG CCAGCCACAG
ATCAGAGACT ACCGGCAAAT GCTGCAGCTC ATCAACCGGG TCATGACCAA GGCCCCGGAA
TTCAACCAGA CGGGTCTCGT CGGGTTTCCC ATTAATGCCA TCATCAACTG GCCCATGGCA
ACTCCGGCCG GGACGACCGT TTTTTTGAAT CCAAAAGTCA ACAGCCAGCT GAAAAAGATT
CTGAATCAAT GGGGTGAGTT TCTGAAATCG AAAGAATCCC GATATGTACT AACTGACCAT
CCCGAAACAG GATGGTTCGG CCGGGACGCA AAAAAAGCGA TGCCGACCTT CATCAAGGAT
TTTCAGTGCG ATCCGAAACA GTCTTACTAC GGATTCACCT CCTGGGATGA CTTTTTTACC
CGCCAGTTCC GGGAAGGACG ACGGCCGGTC GCTTCTCCCA TGGATCATGC GGTCATTGCC
AACTCCTGCG AGTCGGCACC CTACCGGCTC GCCAGGGGCG TGAAAGGGAG CGACACATTT
TGGATCAAAT CGCAGCCTTA TTCACTTTAC CACATGCTGG CAGGCGATCC GCTCATTGGG
CAATTCGAAG GCGGCACCAT CTATCAGGCC TTTCTCAGCG CTTTGAGCTA CCACCGCTGG
CACAGCCCGG TCAGCGGCAG GGTCGTGAAG ACCAAGCTAA TCGAAGGGTC GTACTATGCC
GAAGCATTGT CTGTAGGATT CGATCCTGCG GGGCCAAATG AATCTCAGGG ATACATAACC
CATGTCGCGA GCCGGGCCTT GATCTTCATA GAAGCGGACA ACCCGGATAT CGGCCTGATG
GCAGTTCTTT TCGTGGGCAT GGCGGAGGTT TCCTCAAACG AGATTACTGT GACGGTGGGG
CAACATGTGA GCAAAGGCGA TCAACTCGGC ATGTTCCATT TCGGCGGCTC CACACACTGC
CTGATCTTCC GGCCGCAGGT GAAGCTTGAA TTCGACCTGC GCAGCCAGAC GCCGGGATTG
AATTCCACTA ACATCCCTGT GCGGTCGAAA ATCGCCACGG TTCTGAAGTA G
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| Protein sequence | MLLPAFGYTA AKQSAPNAND KAIPYKVGQW QPSDQKILNQ WVEGLVRETN ANGQPLVPVV
QELKNLIESD PELFMLFMQM FEQVPSNTPK YQKDPTGQPQ IRDYRQMLQL INRVMTKAPE
FNQTGLVGFP INAIINWPMA TPAGTTVFLN PKVNSQLKKI LNQWGEFLKS KESRYVLTDH
PETGWFGRDA KKAMPTFIKD FQCDPKQSYY GFTSWDDFFT RQFREGRRPV ASPMDHAVIA
NSCESAPYRL ARGVKGSDTF WIKSQPYSLY HMLAGDPLIG QFEGGTIYQA FLSALSYHRW
HSPVSGRVVK TKLIEGSYYA EALSVGFDPA GPNESQGYIT HVASRALIFI EADNPDIGLM
AVLFVGMAEV SSNEITVTVG QHVSKGDQLG MFHFGGSTHC LIFRPQVKLE FDLRSQTPGL
NSTNIPVRSK IATVLK
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