Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1256 |
Symbol | |
ID | 6374933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1361532 |
End bp | 1362674 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642683754 |
Product | CRISPR-associated RAMP protein, Csm5 family |
Protein accession | YP_001959669 |
Protein GI | 189500199 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1332] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
TIGRFAM ID | [TIGR01899] CRISPR-associated RAMP protein, Csm5 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00374145 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAAAAG CGCTGATATC GCATAAGGTA AGCCTCACTA CGCTTTCGCC GGTCTTTATC GGGGCAGGGG CGGAACACGT TCTTTCGCCA TACAGCGATT TTGTGCAGCG GGGAGATTCT CTGATCTATA TCGACACCGA CAGGCTCCAG GACGCGATGC AGGGTGACAA GGCACTTATC GAGGCATTCG TGAAAGGTAT GCGGCACATC GAGAACAACC GCTTGACCTT TGTGCTCGAA AAATTCATCA CCGGAACACT GGGCAGGGAG GTCGATGATT TCGCTGCCCG TGTCGTCCGG ATCGACGGGG ATATTCAGAA AAACCATATT CGCAGGTTCA TCGCTACCGG CGGGAAACCG TTCATTCCGG GGAGTTCCCT GAAAGGTGCC ATCAGGACGG CGGTATTGGT CGATTGGCTG CTGAACAGAA AAGCCGGCGA ACCGATTTTT AACCAAATCC GTGAGAATAT CAATAAACGG GATCGGAGAT CTCTTAAAGA CATGAACCTG GAGCAGGCCT GTTTCGGGAC TATTTCTCGT GACGTGTTCC GGAATCTGAG AATCAGCGAT TCGTCAGTGA TTGAGAGTTC GAGCTTGTGG GTTGGGGAGA TGAGACGGGT TGCCTTGCCA ACCGAAAAGA AGAAAAAGCA GCAACAGTCA AGTATTCCTC AGTGGAGTGA AGTCATTGGT CCGTCAGTTG AGACAACATT TCCCCTCTCC CTGACAACTC CGATTGAAAA AACCGGTTTT GATTTTCTCG ACCATCAGTC GGTTACGAAA CTGTTTCCGA TTATCAATCG AATCTCTCTT GATTCCTGTT TGCGTGAACT CGGTGAACTT AAGGGAAATC AGGATTTCAG GGATTTTTTC AGGTTTTATG AAAAGCTTGA ACAGGAAATT ACATCGTTGA AAACTGATGA AGCTATTCTT CGCCTTGGTG GTGGTAAGAC TTGGTTCGAT AACTCGCTCG GCCTTTCCAT CGACTGTGAA GAGTTCCGTC CGGAAGCGTT ACTGAAAAAA TATCTTGATC TGGTTTTGGA TTTCAAACAC GATCCTTTTC CCTCCACAAG ATCGGCTATC GTCAGAAACG GTGTACCGGT TTATCCGCTT GGATGGGTCA AGCTAACACT GCTCAAGAAT TAA
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Protein sequence | MTKALISHKV SLTTLSPVFI GAGAEHVLSP YSDFVQRGDS LIYIDTDRLQ DAMQGDKALI EAFVKGMRHI ENNRLTFVLE KFITGTLGRE VDDFAARVVR IDGDIQKNHI RRFIATGGKP FIPGSSLKGA IRTAVLVDWL LNRKAGEPIF NQIRENINKR DRRSLKDMNL EQACFGTISR DVFRNLRISD SSVIESSSLW VGEMRRVALP TEKKKKQQQS SIPQWSEVIG PSVETTFPLS LTTPIEKTGF DFLDHQSVTK LFPIINRISL DSCLRELGEL KGNQDFRDFF RFYEKLEQEI TSLKTDEAIL RLGGGKTWFD NSLGLSIDCE EFRPEALLKK YLDLVLDFKH DPFPSTRSAI VRNGVPVYPL GWVKLTLLKN
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