| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1256 |
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| Symbol | |
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| ID | 6374933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 1361532 |
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| End bp | 1362674 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642683754 |
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| Product | CRISPR-associated RAMP protein, Csm5 family |
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| Protein accession | YP_001959669 |
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| Protein GI | 189500199 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1332] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01899] CRISPR-associated RAMP protein, Csm5 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00374145 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAAAAG CGCTGATATC GCATAAGGTA AGCCTCACTA CGCTTTCGCC GGTCTTTATC
GGGGCAGGGG CGGAACACGT TCTTTCGCCA TACAGCGATT TTGTGCAGCG GGGAGATTCT
CTGATCTATA TCGACACCGA CAGGCTCCAG GACGCGATGC AGGGTGACAA GGCACTTATC
GAGGCATTCG TGAAAGGTAT GCGGCACATC GAGAACAACC GCTTGACCTT TGTGCTCGAA
AAATTCATCA CCGGAACACT GGGCAGGGAG GTCGATGATT TCGCTGCCCG TGTCGTCCGG
ATCGACGGGG ATATTCAGAA AAACCATATT CGCAGGTTCA TCGCTACCGG CGGGAAACCG
TTCATTCCGG GGAGTTCCCT GAAAGGTGCC ATCAGGACGG CGGTATTGGT CGATTGGCTG
CTGAACAGAA AAGCCGGCGA ACCGATTTTT AACCAAATCC GTGAGAATAT CAATAAACGG
GATCGGAGAT CTCTTAAAGA CATGAACCTG GAGCAGGCCT GTTTCGGGAC TATTTCTCGT
GACGTGTTCC GGAATCTGAG AATCAGCGAT TCGTCAGTGA TTGAGAGTTC GAGCTTGTGG
GTTGGGGAGA TGAGACGGGT TGCCTTGCCA ACCGAAAAGA AGAAAAAGCA GCAACAGTCA
AGTATTCCTC AGTGGAGTGA AGTCATTGGT CCGTCAGTTG AGACAACATT TCCCCTCTCC
CTGACAACTC CGATTGAAAA AACCGGTTTT GATTTTCTCG ACCATCAGTC GGTTACGAAA
CTGTTTCCGA TTATCAATCG AATCTCTCTT GATTCCTGTT TGCGTGAACT CGGTGAACTT
AAGGGAAATC AGGATTTCAG GGATTTTTTC AGGTTTTATG AAAAGCTTGA ACAGGAAATT
ACATCGTTGA AAACTGATGA AGCTATTCTT CGCCTTGGTG GTGGTAAGAC TTGGTTCGAT
AACTCGCTCG GCCTTTCCAT CGACTGTGAA GAGTTCCGTC CGGAAGCGTT ACTGAAAAAA
TATCTTGATC TGGTTTTGGA TTTCAAACAC GATCCTTTTC CCTCCACAAG ATCGGCTATC
GTCAGAAACG GTGTACCGGT TTATCCGCTT GGATGGGTCA AGCTAACACT GCTCAAGAAT
TAA
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| Protein sequence | MTKALISHKV SLTTLSPVFI GAGAEHVLSP YSDFVQRGDS LIYIDTDRLQ DAMQGDKALI
EAFVKGMRHI ENNRLTFVLE KFITGTLGRE VDDFAARVVR IDGDIQKNHI RRFIATGGKP
FIPGSSLKGA IRTAVLVDWL LNRKAGEPIF NQIRENINKR DRRSLKDMNL EQACFGTISR
DVFRNLRISD SSVIESSSLW VGEMRRVALP TEKKKKQQQS SIPQWSEVIG PSVETTFPLS
LTTPIEKTGF DFLDHQSVTK LFPIINRISL DSCLRELGEL KGNQDFRDFF RFYEKLEQEI
TSLKTDEAIL RLGGGKTWFD NSLGLSIDCE EFRPEALLKK YLDLVLDFKH DPFPSTRSAI
VRNGVPVYPL GWVKLTLLKN
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