| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1246 |
|---|
| Symbol | |
|---|
| ID | 6374923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1351658 |
|---|
| End bp | 1352539 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642683744 |
|---|
| Product | DNA methylase N-4/N-6 domain protein |
|---|
| Protein accession | YP_001959659 |
|---|
| Protein GI | 189500189 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0863] DNA modification methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0940338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00345461 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAA GAACCGATTT ATATTTAGGC GACAGTCAGG AAGAACTGAA AAAAATTCCG
GACAACTCGG TAGATCTGAT AGTCACTTCT CCCCCTTATG CCGATCAGAG AAAAAAAACT
TACGGAGGCA TCCATCCTGA TCATTATGTC TCATGGTTTT TGCCGATAGC CGAACAGCTC
ATGCGAGTGC TCAAGCCAAC GGGAACCTTT GTACTGAATA TCAAGGAAAA AGTAGTGAAC
GGTGAACGTA GTACCTACGT TATGGAGCTC ATTCTGGAAA TGAGAAGGCA ACAGGGCTGG
CTATGGACAG AGGAATTTAT CTGGCATAAA AAAAACTGCT ATCCGGGTAA ATGGCCGAAC
CGCTTCAGGG ATTCCTGGGA ACGGCTCATT CAGTTCAATA AAAGCAAACA GTTTTACATG
AATCAGGAAG CCGTCATGGT TCCCATGGGT GAATGGTCAA AAACCAGATT GAAAAATCTC
AGCGAGACCG ATAAAGTGCG TGACGAATCA AAAGTCGGCA GTGGCTTCGG CAAAAACATT
TCAAACTGGT TGGACAGGAA AAAGGCTTAT CCGACAAACG TTCTCCACCT GGCAACGGAA
TGTAATAATA AAAAGCATAG CGCAGCATTT CCGGAAGGGC TCCCTGAATG GTTTATCAGA
TTGTTCACCA AAGAAGGAGA TACTGTACTC GATCCGTTCA TGGGTTCGGG AACGACAAAT
ATCGTTGCAA GCAGAATGAA ACGTCATTCT ATTGGGGTAG ATATTTTGCC GGAGTATTAT
TCTATGGTCT GTGACGAACT CAAACCACAG GAACTTTATC TTCTGGAGCA AACAAAACAA
TATGAAACCG ATACTATCAA GCGACGTATC GAAGTACGTT GA
|
|---|
| Protein sequence | MEIRTDLYLG DSQEELKKIP DNSVDLIVTS PPYADQRKKT YGGIHPDHYV SWFLPIAEQL
MRVLKPTGTF VLNIKEKVVN GERSTYVMEL ILEMRRQQGW LWTEEFIWHK KNCYPGKWPN
RFRDSWERLI QFNKSKQFYM NQEAVMVPMG EWSKTRLKNL SETDKVRDES KVGSGFGKNI
SNWLDRKKAY PTNVLHLATE CNNKKHSAAF PEGLPEWFIR LFTKEGDTVL DPFMGSGTTN
IVASRMKRHS IGVDILPEYY SMVCDELKPQ ELYLLEQTKQ YETDTIKRRI EVR
|
|---|
| |