Gene Cphamn1_1203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1203 
Symbol 
ID6374880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1301560 
End bp1303983 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content50% 
IMG OID642683703 
ProductKojibiose phosphorylase 
Protein accessionYP_001959618 
Protein GI189500148 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1554] Trehalose and maltose hydrolases (possible phosphorylases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.204393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA GATACGATGA GGAGAGTGAC CGCTTTACTG AAGATCCCGT TTTTTTGCTT 
GATCTTTCAC CAAAGCAATG GCTTTTGAGA AGAGGAGGCT ACCGGAATAG TCCGAAACGG
TTGCAGATCA ATGAGACGGT AATGACAATC GGTAATGGCT ATCTCAATAT CAGGGGTAGC
CTGGAAGAGC TGCCGCCCGG CAGTTACAGG GGGATGTATA TCAACGGGAT ATATGACAGG
TCGGAAGCCG ATGTCGAGGA GTTGGTGAAA TGTCCCGTAT GGACGGATGT TTCGTTGTGG
ATTGACGGAT ACAAGGTTTC ACTGCCTGAC TGCAGGGTGC TTGGTCACGA GCAGATGCTG
GATATGCGAA AAGGGATTCT CCATCGTAAA ACAAGATTCA GGCTGCCTGC CGGAAAGATA
GTGACGCTTT CTACCTCAAA GCTTGTTTTT CTGCACAAGG TTCATTGGGG GTTTATGAGG
GTGCGGATAG TTCCTGAAAA TTTCTCGGGA GAGATTCGTG TGTTGAGCGG CCTGAACGGT
GACGTGCTCA ATCGTGGGTT TTTCCACGAT GAAAAGCTCA AACACCTGCA TCTTGAGCGA
ATCGAGCGCG GACGTGACCT GATGTATCTT GAAATGAAAA CCAGGGAGCG TGGGATACGT
ATTGCCAATG CGGCATCATG GCGGATCGTT AACCATGACA GAGCATCGGT CAGATGGGAA
CCGAGAATCT ACGGGGAGAA ATTCACCAGC GAGATGACGC TGCATGCCCA AAAAGGGATT
TCTTATGATT TTGAGAAGTA CGCGGTGGTT TATACGAGCA GAGAGATACC TTCGGAGGGG
ATGTTCAAAA GAACCATATG CGGTTTGAAA TCATTTATCC GCAACGGCGC TTTCAGAGAA
ATCAAGGAGC ATGTCGCGCT GTGGGAAAAA AGTTGGCAGC GGGCCGATAT ACGTATTGAC
GGTGATCATA TTGCACAGAA GGCGGTTCGT TACAATATCT ATCAGCTGTT GATAAACGGG
CCGAGGTTGA CAGGAAGTAT CGGTGCCAAG TTTCTCAGTT CGGAGGGATA TCTCGGCCAT
GTGTTCTGGG ATACAGAGAT TTTTCTTTTC CCGTTCTACC TCTACAACTT CCCGGACATA
GCGAAAAATA TGCTTATGTA TCGGTACGCG ACACTGCCGG GGGCCTTGAA AAACGCGGAG
CGTAACGGTT ATACGGGAGC GAAATACGGC TGGGAGACAG CGACCACCGG AGAGGATGTC
ACGCCGAGGT TTGCTTCTAA ACTGGCGAAA ACCATACGTT TGATCTATAC CGGCACGGAA
GAGGATCACA TTGTTTCCGA TGTCATCTAT GCGATAGAGC GCTACTGCCG GGTTACCGGC
GATGAGGAGT TTTTACTCGG CTATGCTCTT GAAATGATAT TTCAGACAGC CCGTTTCTGG
GCAAGCCGTG TTGTCGCTTC AGGTGACACC TTTGAAATCA GAACGGTTAT TGGCCCGGAT
GAGTTTCACG AACACGTTGA CAACAATGCA TATACCAACT ATCTCGTTCG CTGGCATCTT
AAACTGGCCG TGATTCTCTA TACCTATTTC ACCAAACGGC CCGACAAGCG GTTTGCGTTA
CTTACCCGCA AGCTCTCTCT CCTGCCGGAT GAGATCACCC GTTGGCAGGA AATCAGCAGG
AAACTGCGCT TCTCGATTCA TCCGGAAACG AACCTGATCG AGCAGTTCGA CGGTTATTTT
GGTCTTAAGG ATCATGTTAT TACGAAACAT GACCGCAAGG GGCGGCCTGT ACTGCCCCCG
GGAGTCACCT ACCGGAATAT CGGCCGGACC CGTCTGATAA AGCAGGCGGA TGTCGTCATG
CTGATTCTCC TTTTTCCTCA TGCTTTCAGA GAAAAAGTCA ACAAAGCCAA TTACCAGTTC
TACGAGAAAC GCACGCTGCA CAAATCATCA CTCAGTCACT GTACGCACGC CATGGTAGGT
CTGGCTACAG GCAATCGGCA GCATGCCTAT CACTATTTCA TGAAAACGCT TCAGATGGAT
CTGGAAAACC TGCATGGCAA TACCGACCTC GGCATTCACG CGGCAGCCGT TGGAGGGGCA
TGGCAGACTC TGGTTATGGG GTTCGGCGGC CTGACGCTGA AGTCGGACCG GATCGTACTC
AAGCCCTGGC TTCCGAAAAG ATGGCATCGA CTTGCATTCA GTGTCCGATG GCGCGATCGT
TTTGTCAGGC TCGAAATACG CCACGACAGT GTCGGGATTT TTATCGGGTC GGACAGGCAG
ATGCAACTTC CCTGTACATT CTGGGGAGAG TGCTTTACTA TTACCACAAA TGAGAAGTAT
ATGTTCAGCT ATGAGCCGAT AACATGTTTA AAAGGAGATT GTGATGAAAA ACCTTCGCAT
AGCGCAGATT GCGCCGCTTA TTGA
 
Protein sequence
MTKRYDEESD RFTEDPVFLL DLSPKQWLLR RGGYRNSPKR LQINETVMTI GNGYLNIRGS 
LEELPPGSYR GMYINGIYDR SEADVEELVK CPVWTDVSLW IDGYKVSLPD CRVLGHEQML
DMRKGILHRK TRFRLPAGKI VTLSTSKLVF LHKVHWGFMR VRIVPENFSG EIRVLSGLNG
DVLNRGFFHD EKLKHLHLER IERGRDLMYL EMKTRERGIR IANAASWRIV NHDRASVRWE
PRIYGEKFTS EMTLHAQKGI SYDFEKYAVV YTSREIPSEG MFKRTICGLK SFIRNGAFRE
IKEHVALWEK SWQRADIRID GDHIAQKAVR YNIYQLLING PRLTGSIGAK FLSSEGYLGH
VFWDTEIFLF PFYLYNFPDI AKNMLMYRYA TLPGALKNAE RNGYTGAKYG WETATTGEDV
TPRFASKLAK TIRLIYTGTE EDHIVSDVIY AIERYCRVTG DEEFLLGYAL EMIFQTARFW
ASRVVASGDT FEIRTVIGPD EFHEHVDNNA YTNYLVRWHL KLAVILYTYF TKRPDKRFAL
LTRKLSLLPD EITRWQEISR KLRFSIHPET NLIEQFDGYF GLKDHVITKH DRKGRPVLPP
GVTYRNIGRT RLIKQADVVM LILLFPHAFR EKVNKANYQF YEKRTLHKSS LSHCTHAMVG
LATGNRQHAY HYFMKTLQMD LENLHGNTDL GIHAAAVGGA WQTLVMGFGG LTLKSDRIVL
KPWLPKRWHR LAFSVRWRDR FVRLEIRHDS VGIFIGSDRQ MQLPCTFWGE CFTITTNEKY
MFSYEPITCL KGDCDEKPSH SADCAAY