Gene Cphamn1_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1197 
Symbol 
ID6374874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1293847 
End bp1295439 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content50% 
IMG OID642683697 
Producthypothetical protein 
Protein accessionYP_001959612 
Protein GI189500142 
COG category[S] Function unknown 
COG ID[COG2187] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.636152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.688701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGAAG ACGATACGAG CACTATGGTC AATCTGGTCC AAAAGCTGCG ACAACCTTCC 
GCCTATCCTC ATCCCGTTGA GAAAATAGAG GTTGTTGAAA CACATATTTC TCTTGTTTTT
TTAACCGGTA CTTATGCCTA CAAGATAAAA AAGGCAGTTA ACCTCGGGTT CCTTGATTTT
TCTTCTCTCG AAAACAGGGA GCACTTCTGC AGGGAGGAAC TTCGCCTCAA CCGCAGGCTC
TGCAAAGAAC TCTATCTTGA CGTTCTGCCT GTCATGATTC AGGGCGAAAG CGTCATGATC
GGCGGCAAGG GAACCATCAT TGATTTCGTG GTAAAGATGC TGCAGTTTGA CCGGACCAAG
GAAGTCGATA CGCTGCTTGC GTCAAACAGA ATCACCGGAG ATCATATAGA CCGGATAAGC
CGGATCGTTT CCGCATTCCA TGAATCCGCT CCCGCCGCAG GCCCTGACAG CGCTTACGGC
AGGGCGGAGA TCCTCATCAA GCCGATTCGC GACAATTTCA CCGAAGCTGA ACGGCTGAAA
AGCCAACTGC AGGAAAAGGC GTTGCTCAAA AGACTGAAAC AGTGGACGGA AAGCGAATAC
AGCCGTCTGA TGCCCCTGTT CGCCGAAAGA AAAGCAAACG GAGCCGTCAG GGAGTGCCAC
GGCGACATGC ATACAGGAAA TATGGTGCTC TGGAAGAAGA GCGTCATGAT TTTCGACTGC
ATTGAATTCA ACCCTCTGCT GAGTACTATC GATGTCATGA GTGAAATTGC CTTTCTGATC
ATGGATCTGG AGCACAGCGG TCATCCGGAA TATGCGTGGA GGTTTCTCAA CAACTACCTG
TCGCTGACCG GAGACTATGA AGGACTCCCT CTTCTCAGAT TCTACAAGAC CTACAGGGCG
ATGGTGCGTG CAAAAGTAAC CGCCATACGC CATCTTCAGG AGGAAAATCG GGAGGAAAAA
GAAAAAACGC TTGCGGAACA CTGTTCCTAC ATTTCGACAG CTCTCACCTG TTCGTCACCT
GCACATCCCG GACTTATCCT TACCTGCGGT GTTTCCGGAA GCGGAAAAAC ATCCGTCGCG
CGGGAAATAG CCTCACGCAT TCCAACCATC CATATCCGAT CGGATATCGA AAGAAAAAGA
CTTTTCGGCT TGAAGCAATT CGACCGAAGC GGCAGGGATC TGGGCAGGGA AATGTATTCT
GAAAAAAGCT CAAGCAGAAC CTACACAAGG CTCTTCGAGA TAGCATCGAC CTGCCTGATG
AATGGCTATA CGGTTATTGT CGATGCGACG TTTCTGCGTC GTGAAGAGAG GGAACGGTTT
ATGGCCCTCA GCAGGAACGC TCAATGCCCT GTAATCATAC TCAATTGCAC AGCCCCGGTG
AAACTGCTTG AAGAGCGCGT CACGACAAGA CAGCAATCGG GCGGCGATGC CTCTGAAGCC
GATCGATCGG TGCTCATGGA GCAACTCCGG CATCTCAGAT CTTTTTCATC TGAAGAACAG
CGCGTCACAA TAACCATCGA TACATCGACT TCAGCATCGA CAGCGTCAGG CATTACCGAG
ACAATCTCAC GGATACAGCA GGGTTCCCCC TAA
 
Protein sequence
MQEDDTSTMV NLVQKLRQPS AYPHPVEKIE VVETHISLVF LTGTYAYKIK KAVNLGFLDF 
SSLENREHFC REELRLNRRL CKELYLDVLP VMIQGESVMI GGKGTIIDFV VKMLQFDRTK
EVDTLLASNR ITGDHIDRIS RIVSAFHESA PAAGPDSAYG RAEILIKPIR DNFTEAERLK
SQLQEKALLK RLKQWTESEY SRLMPLFAER KANGAVRECH GDMHTGNMVL WKKSVMIFDC
IEFNPLLSTI DVMSEIAFLI MDLEHSGHPE YAWRFLNNYL SLTGDYEGLP LLRFYKTYRA
MVRAKVTAIR HLQEENREEK EKTLAEHCSY ISTALTCSSP AHPGLILTCG VSGSGKTSVA
REIASRIPTI HIRSDIERKR LFGLKQFDRS GRDLGREMYS EKSSSRTYTR LFEIASTCLM
NGYTVIVDAT FLRREERERF MALSRNAQCP VIILNCTAPV KLLEERVTTR QQSGGDASEA
DRSVLMEQLR HLRSFSSEEQ RVTITIDTST SASTASGITE TISRIQQGSP