Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1180 |
Symbol | recR |
ID | 6374855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1270892 |
End bp | 1271506 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642683678 |
Product | recombination protein RecR |
Protein accession | YP_001959595 |
Protein GI | 189500125 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0353] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00615] recombination protein RecR |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000222469 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0115718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATATA CTTCAACGGC GATTGAGGCA CTGATTGAGG AGTTCGCGAA ATTGCCGGGG ATAGGCCGTA AGACAGCCCA GCGACTGTCT ATGCATATTC TTCAGGAAAA GCCGGGAGAG GTCGAAAAGC TTTCAAGAGC GCTTACCGAT GTGAAGGAGA AGGTGATCAG CTGTTCAATC TGCCAGAATG TTACCGATCG CGGCGATGAC CCCTGTTCGA TATGTCGGGG TAAAGGCCGT GACCTCTCGA AGATCTGTGT TGTTGAGTCG CCCCCGGATG TTCTCGCATT TGAAAAAACG GCTCAGTATC GAGGTCTCTA TCATGTACTT CACGGCGTTA TCTCTCCACT TGATGGTGTC GGGCCGGATG ATATCAAGGT CAAGGAGCTT CTGGCACGTC TCTCTCTGCA AGACGGCAGA GAGGTGAGTG AGGTGATCAT GGCTCTCAGT CCGACAGTGG AAGGGGAGAC AACTGTTCTG TACGTGAGCA GGCTTTTGAA GCCACTGGGC ATAGAGGTGA CCAAGATAGC GAGAGGAATT CCGGTGGGTG CCGAACTTGA ATATATCGAT GAGGCCACCC TGTCCAGGGC AATGGAGGGG CGTTCGGTGT TATAG
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Protein sequence | MRYTSTAIEA LIEEFAKLPG IGRKTAQRLS MHILQEKPGE VEKLSRALTD VKEKVISCSI CQNVTDRGDD PCSICRGKGR DLSKICVVES PPDVLAFEKT AQYRGLYHVL HGVISPLDGV GPDDIKVKEL LARLSLQDGR EVSEVIMALS PTVEGETTVL YVSRLLKPLG IEVTKIARGI PVGAELEYID EATLSRAMEG RSVL
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