Gene Cphamn1_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1180 
SymbolrecR 
ID6374855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1270892 
End bp1271506 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content53% 
IMG OID642683678 
Productrecombination protein RecR 
Protein accessionYP_001959595 
Protein GI189500125 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000222469 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0115718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATATA CTTCAACGGC GATTGAGGCA CTGATTGAGG AGTTCGCGAA ATTGCCGGGG 
ATAGGCCGTA AGACAGCCCA GCGACTGTCT ATGCATATTC TTCAGGAAAA GCCGGGAGAG
GTCGAAAAGC TTTCAAGAGC GCTTACCGAT GTGAAGGAGA AGGTGATCAG CTGTTCAATC
TGCCAGAATG TTACCGATCG CGGCGATGAC CCCTGTTCGA TATGTCGGGG TAAAGGCCGT
GACCTCTCGA AGATCTGTGT TGTTGAGTCG CCCCCGGATG TTCTCGCATT TGAAAAAACG
GCTCAGTATC GAGGTCTCTA TCATGTACTT CACGGCGTTA TCTCTCCACT TGATGGTGTC
GGGCCGGATG ATATCAAGGT CAAGGAGCTT CTGGCACGTC TCTCTCTGCA AGACGGCAGA
GAGGTGAGTG AGGTGATCAT GGCTCTCAGT CCGACAGTGG AAGGGGAGAC AACTGTTCTG
TACGTGAGCA GGCTTTTGAA GCCACTGGGC ATAGAGGTGA CCAAGATAGC GAGAGGAATT
CCGGTGGGTG CCGAACTTGA ATATATCGAT GAGGCCACCC TGTCCAGGGC AATGGAGGGG
CGTTCGGTGT TATAG
 
Protein sequence
MRYTSTAIEA LIEEFAKLPG IGRKTAQRLS MHILQEKPGE VEKLSRALTD VKEKVISCSI 
CQNVTDRGDD PCSICRGKGR DLSKICVVES PPDVLAFEKT AQYRGLYHVL HGVISPLDGV
GPDDIKVKEL LARLSLQDGR EVSEVIMALS PTVEGETTVL YVSRLLKPLG IEVTKIARGI
PVGAELEYID EATLSRAMEG RSVL