| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1173 |
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| Symbol | |
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| ID | 6374848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1260990 |
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| End bp | 1264310 |
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| Gene Length | 3321 bp |
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| Protein Length | 1106 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642683671 |
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| Product | methylmalonyl-CoA mutase, large subunit |
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| Protein accession | YP_001959588 |
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| Protein GI | 189500118 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00593374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTCGAGG AATTCAGGCA GATCACGAAA AAAGAGTGGA AAGAAACGGT ACTCAAAGAC
CTCAAGGGGG CAAAGTACAG CACCATTGAA TGGACAACCG GAGAGGGATT TACTCTTGAA
CCGTATTACA GTCCGTCCGA AAGGCCTTTC TGCAGCATTC CTCCCCTGCC GGGCAGAAAG
GATAACAGCT GGAAATCCGG TGTGGAGATT GACGCAACCG ATTCGACTCA GGCAAACCAG
GAAGCCCTCC AGCATATCGA AGGGGGCATG GATTGTCTCC TTTTCAATAC CTCGGGTTCC
GGAGATCCTG ACGAAAACAC ATTGACCGCG CTTCTGCACG ATATTCAACC TGGAACTGTT
TCCTGCTACT TTTCCGGCAT CAAAAACCCG GTACGGTTTA TGCGCTCTCT TTCTCATCTT
CAGGGATTCT CATTCATAGC CGGAGGATTG ATAGACTGCG GAACTGACAA TCCTGAGCAT
CTTCTTGAGT ATAGTCAAAC CGCAAAAGCC TTCAGAACGC TCGGAATAGA TGGCCGACGA
TGGAGAAAGA ACAACGGAAC GATCGCCCAG GAACTCGGAT ACATAATCGC TTCAGCCAGG
GATCTTTTCA GGGAAGTTGA CAAAAGCGGC ATTTCCCCGC TTCAGGCAGT TTCCGCCATG
CATGTCAATT TCTCCGTCGG CTCCTCTTTT TTTATGGAAA TCGCTCGATA TACAGCATTC
CGGCTTCTCT GGCAGAGAAT GACGGAGAGC ATCGATCATC CCGGTCTCAG GGAGCCTGAG
ACATCGGCGA CAACGATGAC AGGCCCGCCA TTCCGTGACG ATCACCACAG CAGGATCATA
GAACTTGCCA CCATCTCCGC CGCCTCCGTT CTCGGGGGAT GCGGAACGCT CTTTATCAGT
CACTTCGATC AGGAGAAGAA CAGCGACCGG ACCTTATCGG CACGCGTATC AAGAAACATA
CACCATCTTC TCAAGTATGA AAGCATGCTT GAGTGTGTGA TAGATCCTGC TGCAGGATCT
GCATATATAG AAACTATCTC GAAAAATCTC GCTGAATCCG CATGGAAGAT ATTTACCTCC
ATCGAGACTG CGGGAGGCAT GCGTTCAGCA GAACAGAAAG AGGTTTTCGA AAACCTGCTC
GCAGCACATG AAGCGCCCGT AACGGAACAG GGAACCGTTG CATCCCTTCC CCGGCAATTC
TCCAGGACGA CCTGCAGTCA TGTCCCCTAT CATGAATCGC CGACCAATGA AGGCATAGCG
CTGAAAAACC TCTATACCTC GGATGATATC ATTGACGTTG AACAGCTGCA TTTTGTGCCC
GGTCTCCCCC CGTATACAGG CGGACCGTAT ACGACCATGT ATACCATACG CCCCTGGACG
ATAAGGCAAT ACGCAGGGTT CTCGACCGCT GAAGAATCGA ACGATTTTTA CCGGAAAAAC
CTCGCTGCAG GACAGAAAGG ACTCTCCGTC GCGTTCGACC TTCCTACACA CCGCGGCTAT
GACTCCGATC ACCCCCGGGT GGTCGGCGAT GTCGGCAAAG CGGGAGTCGC CATCGATACG
GTGGACGATA TGAAGATATT GTTCGACCGG ATTCCTCTGG ACAAAATGTC CGTCTCCATG
ACCATGAACG GCGCAGTACT TCCCGTCATG GCGTTCTATA TTGTAGCTGC CGGTGAACAG
GGGGTAGAAC AGCAACAACT GAGCGGCACC ATTCAGAACG ACATCCTCAA GGAGTTCATG
GTACGCAATA CCTATATCTA TCCTCCGGCT CCATCCATGC GTATCGTCGC GGATATCTTC
CGCTATACGT CGGAACGAAT GCCGAAGTTC AACTCAATCA GCATATCGGG TTATCATATG
CAGGAAGCGG GCGCGACCGC TGATCAGGAA CTGGCCTATA CCCTCGCCGA CGGGCTCGCC
TATCTCAGAA CCGGTATCGA TGCCGGGCTA CACATAGACG ATTTTGCCCC CCGCCTCTCG
TTTTTCTGGG GTATCGGCAT GAACTTCTTT ATGGAGATCG CTAAACTGAG GGCCGCAAGA
ATGCTCTGGG CGAAAATCGT CCGGCAGTTC AACCCTTCGA ACCCGAAATC CCTGATGCTG
CGCTCACACT GCCAGACTTC AGGATGGAGC CTTACCGAAC AGGACCCGTT CAACAATGTC
ACCCGCACCT GTATAGAAGC GCTCGCCGCA GTTCAGGGCC ACACACAATC GCTACACACC
AACGCTCTGG ACGAAGCCAT CGCCCTTCCT TCGGTCTTTT CAGCACGTAT CGCCCGAAAC
ACACAGCTCT ACCTGCAGGA AAAAACCGAT ATCACACGCG CTATCGATCC CTGGTCCGGC
TCCTACTACA TTGAAAGCCT GACCAGAGAG CTTGCCGAAA AAGCATGGGC ACTCATAGAG
GAAATCGAGG CTTCCGGGGG CATGGTCAAG GCAATTGAAG AAGGTATTCC AAAAATACGT
ATCGAGGAAG CAGCAACCCG AAGACAGGCA GGAATCGATA GCGGAACAGA GAGTATCATC
GGGGTCAACC GCTTTAGAAA CACCGATAAA ACGCACATAG AAACTCTTGA GGTCAACAAT
ACCGAAGTAC TGGACTTTCA ACTCGAAAAG CTCTCGGCGG TCAAAGAAAA ACGAGACAAC
CGGAAAGTCA GTGATTCGCT CGAAGCACTC AGAATGTGCG CAGAGAGCGG TAAGGGAAAT
CTGCTTGAAA CGGCTGTTGA AGCGGCACGC TCAAGGGCGA CGCTGGGTGA AATTTCCGAT
GCCTGTGAAG CCTCGTTCGG CAGATACCGC TCCTCGGTTC AGCTCAATGC AAATGTCTAC
CTCTCCCAGA TGCGCAATAA CGGATTATTT ATGAAAGCAC ATGATCTTTC AGAAACATTT
ACGCGCCATG AAGGCCGCAG GCCGCGAATA CTTGTAGCCA AGGTCGGACA GGACGGACAT
GACAGGGGAG CAAAAGTGAT CGCGACAGCT TTTGCCGACA TTGGATTCGA TGTCGATATC
AGTCCGCTCT TCCAGACCCC TGAAGAAGTC GTACAACAGG CACTTGACAA CGATGTTCAC
CTTGTAGGTG TTTCAAGTCT TGCCGGCGGC CACAAAACGC TGATACCCGA GATTGTTGAA
GAACTGCGCA AGGCAGGCAG AGCTGATATT CTGGTCATTG CGGGCGGGGT TATCCCGGAG
AAAGACTACA ATTATCTGAT AGATGCCGGA ATAGCAAAAG TTTTCGGGCC GGGAACAGTG
ATCGCTGAAG CCGCCGCAGA TATTCTGAAG CTCCTCATCG ACAGATCAGC GTCTGAAGAT
ACGACCGGCC TGCATACATA G
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| Protein sequence | MFEEFRQITK KEWKETVLKD LKGAKYSTIE WTTGEGFTLE PYYSPSERPF CSIPPLPGRK
DNSWKSGVEI DATDSTQANQ EALQHIEGGM DCLLFNTSGS GDPDENTLTA LLHDIQPGTV
SCYFSGIKNP VRFMRSLSHL QGFSFIAGGL IDCGTDNPEH LLEYSQTAKA FRTLGIDGRR
WRKNNGTIAQ ELGYIIASAR DLFREVDKSG ISPLQAVSAM HVNFSVGSSF FMEIARYTAF
RLLWQRMTES IDHPGLREPE TSATTMTGPP FRDDHHSRII ELATISAASV LGGCGTLFIS
HFDQEKNSDR TLSARVSRNI HHLLKYESML ECVIDPAAGS AYIETISKNL AESAWKIFTS
IETAGGMRSA EQKEVFENLL AAHEAPVTEQ GTVASLPRQF SRTTCSHVPY HESPTNEGIA
LKNLYTSDDI IDVEQLHFVP GLPPYTGGPY TTMYTIRPWT IRQYAGFSTA EESNDFYRKN
LAAGQKGLSV AFDLPTHRGY DSDHPRVVGD VGKAGVAIDT VDDMKILFDR IPLDKMSVSM
TMNGAVLPVM AFYIVAAGEQ GVEQQQLSGT IQNDILKEFM VRNTYIYPPA PSMRIVADIF
RYTSERMPKF NSISISGYHM QEAGATADQE LAYTLADGLA YLRTGIDAGL HIDDFAPRLS
FFWGIGMNFF MEIAKLRAAR MLWAKIVRQF NPSNPKSLML RSHCQTSGWS LTEQDPFNNV
TRTCIEALAA VQGHTQSLHT NALDEAIALP SVFSARIARN TQLYLQEKTD ITRAIDPWSG
SYYIESLTRE LAEKAWALIE EIEASGGMVK AIEEGIPKIR IEEAATRRQA GIDSGTESII
GVNRFRNTDK THIETLEVNN TEVLDFQLEK LSAVKEKRDN RKVSDSLEAL RMCAESGKGN
LLETAVEAAR SRATLGEISD ACEASFGRYR SSVQLNANVY LSQMRNNGLF MKAHDLSETF
TRHEGRRPRI LVAKVGQDGH DRGAKVIATA FADIGFDVDI SPLFQTPEEV VQQALDNDVH
LVGVSSLAGG HKTLIPEIVE ELRKAGRADI LVIAGGVIPE KDYNYLIDAG IAKVFGPGTV
IAEAAADILK LLIDRSASED TTGLHT
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