| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1139 |
|---|
| Symbol | |
|---|
| ID | 6374814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1223431 |
|---|
| End bp | 1223874 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642683641 |
|---|
| Product | putative anti-sigma regulatory factor, serine/threonine protein kinase |
|---|
| Protein accession | YP_001959558 |
|---|
| Protein GI | 189500088 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.212464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATGTA TATTTTCCAT TATGCCAGTC TATGACCTAA AACTTGCAAG CAGTTTTGAC
GAATGCAGGA AGCTTCGAGA CTATCTCGCG GTGATGGCTG ATCGGGAGGG ATTCAGTCAG
GCATTTTTCG AGGAACTTGA GCTTGTTGTA AAGGAGGCCT TTGTGAATGC CGTAAGGCAT
GGCAATGGAG CGGACAACGA GGATGTGCCT GTTATGTTGC ATTTTGACAG TTTCACGGAT
GAGAGCGGCA GCATTCTGTT GATCGAAGTT GCTGATTGCG GTAACGGTTT CGCGATGTAT
GAGATCGAGA ATCCAGCACT TTCTTCTCAT GACATGAAAT TGTCAGGCAG GGGAGTATTC
CTGATCGGCT GTTTTGCCGA GTTCATGGAT CAGGTGTGCG ATGAAACCGG GTGCAGGCTG
ACGCTGAGGA TGAGGCCGTA TTAG
|
|---|
| Protein sequence | MRCIFSIMPV YDLKLASSFD ECRKLRDYLA VMADREGFSQ AFFEELELVV KEAFVNAVRH
GNGADNEDVP VMLHFDSFTD ESGSILLIEV ADCGNGFAMY EIENPALSSH DMKLSGRGVF
LIGCFAEFMD QVCDETGCRL TLRMRPY
|
|---|
| |