Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1087 |
Symbol | |
ID | 6374761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1174842 |
End bp | 1175471 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642683588 |
Product | glycosyl transferase family 2 |
Protein accession | YP_001959506 |
Protein GI | 189500036 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.674225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTA CCCGCATACC TGAAATATCG ATTATCCTGC CAACCTATAA TCGGGAAATA CCGCTGCTAC GAGCGGTGCG GAGTGTCATC GACCAGACGT TTTCAGACTG GGAACTTATC GTTGTCGATG ACGGCAGTAC GGACAGAACC TTCGAGCGTC TGTCGGAGTT CCTGACAACG TATGATACCA TCCGCTACAT GAAGCACTCG AACCGCAAGC CTGCTTTGTC AAGAAACGCC GGAATACAGG CCTCATTCGG CAGATACATC ACCTTTCTCG ACAGTGATGA CTACTATCTT CCCGAGCATC TTGAATCCCG TGTTTCCTGT CTGGAACAGC ATCCTGAAAC AGACCTGCTT TCCGGGGGGT TCTGCGGAGA TGACGATGTC TATGTGCCTG ACTGCTACCA CCCGGGCAGG AAAATTCACA TTCAGGAATG CATTCTGGGC GCGACCCTTT TCGGAAAACG CAACCTGTTT TTCTCACTCG AAGGATTTGG AAACCTCGAC TATGCGGAAG ACACAGACCT CTGGAAACGC GCCTCGAAAC GCTTCAACGT CAAAAAACTC TCCGAACCGA AAACCTATGT CTACGAACGT TCCGGTGACA GCATCACAAG AAATCGGTAG
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Protein sequence | MKFTRIPEIS IILPTYNREI PLLRAVRSVI DQTFSDWELI VVDDGSTDRT FERLSEFLTT YDTIRYMKHS NRKPALSRNA GIQASFGRYI TFLDSDDYYL PEHLESRVSC LEQHPETDLL SGGFCGDDDV YVPDCYHPGR KIHIQECILG ATLFGKRNLF FSLEGFGNLD YAEDTDLWKR ASKRFNVKKL SEPKTYVYER SGDSITRNR
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