Gene Cphamn1_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1086 
Symbol 
ID6374760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1174097 
End bp1174633 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content51% 
IMG OID642683587 
Producthypothetical protein 
Protein accessionYP_001959505 
Protein GI189500035 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.661048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAT CCGTTACCGT CTACTGCAGT TCGAGCAGCC AATGCCCGAA AGAATATTTC 
GATGCAGCGG CAGAACTCGG CAAAGCTCTT GCTGAACGAG CTATCACCCT TGTTTTCGGG
GGCGGCAATG TTGGACTGAT GGGATGCATA GCAAATGCGG TCATGCGGAA CGGCGGAGCC
GTCAAAGGAA TCATGCCCCG ATTCCTCGAG GAAAGAGAAA TCGCCCATTC CGGTATAACA
GAGCTGCACA TCGTCGATAC CATGCATGAG CGAAAGATGA TGCTTGCCGA ATTGGCTGAC
GCCTTCATCG TTCTTCCCGG CGGCTTCGGC ACCCTCGACG AACTTGTAGA GGTACTCACC
TGGAGGCAGC TTGGTCATCA CTGCAAACCG ATTATCCTTT TCAACATCGC CGGTTTCTGG
GACCCGCTTC TTCAGTTCTT CGATACTCTT GCCGGTCAGA AGCTTGTAAA GCCTGACCAT
GAAAACCTGT ATCAGGTGTG CAGTTCCATC GATGAAATAT TCGGGATAAT TTGCTGA
 
Protein sequence
MTTSVTVYCS SSSQCPKEYF DAAAELGKAL AERAITLVFG GGNVGLMGCI ANAVMRNGGA 
VKGIMPRFLE EREIAHSGIT ELHIVDTMHE RKMMLAELAD AFIVLPGGFG TLDELVEVLT
WRQLGHHCKP IILFNIAGFW DPLLQFFDTL AGQKLVKPDH ENLYQVCSSI DEIFGIIC