Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1064 |
Symbol | |
ID | 6374738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1148703 |
End bp | 1149284 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642683567 |
Product | pentapeptide repeat protein |
Protein accession | YP_001959485 |
Protein GI | 189500015 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00169254 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000682952 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAAAGAG ACAGCACAGA ACTCACCGAA AACAAAACGT TTGAGAAAGT CTCCTTTGGT GAAGAGAACC TTCTTCAGGG AGTATACGAG GAATGCCGGT TCATCCGTTG CAACCTCGAA TACACCGATC TTTCCGGTAT AACCTTCAGG AACTGCACTT TCAACAACTG CGACCTCAGC CTGGCGACGC TCAGGGAGAC CGGTTTTCAA GAGGTGCATT TTTCGGACTC CAAGCTGCTC GGTTTGCAGT TCTGCGATTG CAGAGAACTG CTGCTGGAAT TCGAGTTCGA ACAGTGCATG CTGAAACTAT CGAACTTCCA AAGATTGAAC CTTAAAAACA CACAATTCAC CGATTGCAAC CTCCAGGAAG CAGATTTCAC CGGCACCGAC CTGACCGGAG CAACCTTCCA GAACTGCGAT CTGTTGCGCA CAACCTTCGA CCATACAATC CTTGAGAAAT CAGACTTCCG AACTGCGTAT AACTTCTCCA TCAACCCGGA AACAAACCGG ATACGCAAGG CGAGGTTTTC ACTGACGGGT GTAGTGGGGT TGCTGGATGG ATATGGGATT GAGATTGAGT AA
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Protein sequence | MKRDSTELTE NKTFEKVSFG EENLLQGVYE ECRFIRCNLE YTDLSGITFR NCTFNNCDLS LATLRETGFQ EVHFSDSKLL GLQFCDCREL LLEFEFEQCM LKLSNFQRLN LKNTQFTDCN LQEADFTGTD LTGATFQNCD LLRTTFDHTI LEKSDFRTAY NFSINPETNR IRKARFSLTG VVGLLDGYGI EIE
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