| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1025 |
|---|
| Symbol | |
|---|
| ID | 6374696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 1104494 |
|---|
| End bp | 1105252 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642683526 |
|---|
| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| Protein accession | YP_001959447 |
|---|
| Protein GI | 189499977 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCAT ATGCCATTAT CGCCGCCAGC GGCGTCGGAA AACGAATGAA GCTTCAGGGT
TCTCTCAGCA AGCAGTTTCT TCAGATCGGC GGCTTCCCTG TCATCTATCA TACGCTTTCC
GCATTCGAAC GCTCAGCATC CGTAGATTCG GTCTTTATCG CCACCAGACA GGAAAGTATC
GAGCTGCTCG AAAACATGAG AGACGAGTAC GGATTCACTA AAATAGCCGC CATTATTCCG
GGCGGAAAGG AACGCCAGGA CTCCATCTAC AACTGTATCG AACTCATCGA ACGGCAAATT
CTTGACTCCG GCACAGCACC GGATGCGATT CTGGTGCATG ATGGCGCAAG ACCGTTCATC
CAGCCCGATG AAATAGATGA GATCGCCGCT CTTTCAGCAC AATACGGAGC TTGTGTTCCA
GCAACAAAAC CCAAGGACAC CATCAAGTTC ATCTCCGAAA ACGATCCCGG TTATTTCGGG
AGAACGCTGG ACAGAAGTCG CCTGCTTCAG GTGCAAACGC CGCAGGGCTT CGCCTCGAAA
ACCCTGATTC AGGCACATAA GCACGCCAGA CTGGAACAAA CCTACGCCAC CGACGACGCC
GCTCTGGTTG AAGAGTTTTT CCCCGAACAG CATATCAGGA TACACGAAAC CGGGTATCAC
AACATCAAAA TCACCACACC GGAGGACATT CACCTCGCTG AAGCGATTCT GGCTAAACTG
CAATCACAAC AGGAATTGAC TTCGTCCAAA AAAAATTAA
|
|---|
| Protein sequence | MSAYAIIAAS GVGKRMKLQG SLSKQFLQIG GFPVIYHTLS AFERSASVDS VFIATRQESI
ELLENMRDEY GFTKIAAIIP GGKERQDSIY NCIELIERQI LDSGTAPDAI LVHDGARPFI
QPDEIDEIAA LSAQYGACVP ATKPKDTIKF ISENDPGYFG RTLDRSRLLQ VQTPQGFASK
TLIQAHKHAR LEQTYATDDA ALVEEFFPEQ HIRIHETGYH NIKITTPEDI HLAEAILAKL
QSQQELTSSK KN
|
|---|
| |