Gene Cphamn1_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1014 
Symbol 
ID6374683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1087670 
End bp1088866 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content51% 
IMG OID642683514 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_001959437 
Protein GI189499967 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.561354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC AGGTTATCGC CCGAAAATAC AGGCCAAAAA AGTTCGCCGA TATAACGGCT 
CAGGAACATA TTACCCGTAC TATCCAGAAC TCCCTCAGGC TGGGCAGAGT GGGGCACGGT
TACATATTTT CAGGTCTCCG CGGAGTGGGA AAGACAACTG CTGCCAGAGT GTTTGCAAAA
GCGGTCAATT GCAGCAGAAT GATTGATGAT CCGGTATATC TCAAGGAGGT GACCGAGCCT
TGCGGAGAAT GTGAAAGCTG CCGCGATTTT GATGAAGGAA CCAGTCTCAA TATTTCGGAG
TTCGACGCGG CATCCAACAA CAGTGTAGAT GATATCAGGC AGCTCAGGGA GAATGTTCGT
TACGGGCCGC AGAAAGGCCG TTTCAGGGTA TACATTATCG ATGAGGTGCA TATGCTCTCG
ACGGCGGCGT TCAACGCTTT CCTGAAAACG CTCGAAGAGC CGCCGGCGCA TGCTATCTTT
ATCTTCGCGA CAACAGAGCT GCACAAGATC CCCGCGACAA TCGCTTCCCG CTGTCAGCGG
TTTAATTTCA AGCGGATTCC GCTTGAGGAT ATTGAAAAGC AGCTTCAGGG GATATGTGAA
GCTGAAGATC TCGGTGTAGA CAGCGAGTCC CTGCAGCTTA TCGGACGCAA GGCACAGGGG
TCGATGCGGG ACGCTCAGAG TATTCTCGAT CAGGTTATCG CATTTGCTGT CGAGCAGGAT
GATGAGCGGT CGATTCGCTA CGAAAAGGTT GCAGAACTGC TCAACTACAT CGATGATGAC
CATTTTTTCG CGGTCACCGA TGCGGTGGCT GATCGAGACC CTGAGAAAAT GCTCGATGTC
GCAAGGTTTG TTATTGATAA TGGTTATGAT GAGCAGGATT TCCTTGAAAA GCTTCTGGAG
CATATGAGGA ATTTTCTTAT TGTCTTCAAT CTGCGTTCAA CCAGACTGGT TGAGCGGCCT
GAACAGGTGA GGGCGCGCTA TGAGCGCGAT ACTGCCCGTT TCAATCCCTC CCTCATCATG
CGGATGGTGG ACCTGCTTCT TCAGGCTCAG AAAGAACTCA AGTTTCAGTT TGAGTATCAG
TTCCGTTTTG AACTTGTCCT GCTCAAACTC ATCGAAATCG GTAACAGTGC CGGCACTTCA
TCCGCTGCGA CGTCCCCGGG AGGGGCGTCT GAAAAAAAGC CGGCAGTGCA GCACTGA
 
Protein sequence
MSYQVIARKY RPKKFADITA QEHITRTIQN SLRLGRVGHG YIFSGLRGVG KTTAARVFAK 
AVNCSRMIDD PVYLKEVTEP CGECESCRDF DEGTSLNISE FDAASNNSVD DIRQLRENVR
YGPQKGRFRV YIIDEVHMLS TAAFNAFLKT LEEPPAHAIF IFATTELHKI PATIASRCQR
FNFKRIPLED IEKQLQGICE AEDLGVDSES LQLIGRKAQG SMRDAQSILD QVIAFAVEQD
DERSIRYEKV AELLNYIDDD HFFAVTDAVA DRDPEKMLDV ARFVIDNGYD EQDFLEKLLE
HMRNFLIVFN LRSTRLVERP EQVRARYERD TARFNPSLIM RMVDLLLQAQ KELKFQFEYQ
FRFELVLLKL IEIGNSAGTS SAATSPGGAS EKKPAVQH