| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1004 |
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| Symbol | ddl |
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| ID | 6374673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1078209 |
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| End bp | 1079291 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642683504 |
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| Product | D-alanyl-alanine synthetase A |
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| Protein accession | YP_001959427 |
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| Protein GI | 189499957 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0714352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAACG TTACCGTAGC CCTGCTTTTC GGAGGTAAAT CTTCAGAACA TGAAATCTCA
ATTATTTCAG CTAAAGCTGT CTCCGCACAT ATAGACCGTA CCACCTATAC ACTCTTTCCC
CTCTACATCT CCCGGGACGG CCGATGGTTC AAAGGCAGAA CCGCCCGAAA AGTTCTTGAT
CTCGATATAA CAGGGCTGCT CAAATCCCGG ACTATCGAGA CGACAAATCG CCAGTTGCTC
GCCATGACTG AAAATCGTGA TGAGGACCTG TTCGACTTTA ATTTTCAGAA AGAAGGAATC
GAGGTGGCGT TTCCCGTGCT CCATGGTGCC TATGGGGAAG ACGGCAAAAT ACAAGGCCTT
CTTGAAGTAT TCGCAATTCC CTACACCGGC TGCAACGTAC AATCCTCATC CATGACCATG
GACAAGGAGA TAACGAAACT CTGTGCCGTG CAGGCAGGTA TTCACGTAGC GGACTATATG
ACGGTACTTC GTCCGGATTA CCTGAACAAC CGGTCAGCAA TAGCAGAAAC CATAAAAAAA
CGGTTTGCGC CGCCGTTCTT CGTAAAGCCC GCGAATCTTG GTTCGTCGGT AGGTATTGCA
AAAATTCACT CTTTCGATGA GCTTGAAAAT GCACTTGATG AAGCCTGCAG ACTCGACGTC
AAGATTCTTG TTGAAAAAGC GATCGAGGGA CGCGAAGTAG AGGTTGCCGT ACTGGGAAAC
GAACATCCCA TAGCCTCTGT ACCTGGAGAG ATTGAGCCGG GGGGGGATTT TTATGATTTT
ACAGATAAAT ATATCGACGG CTCCGCCAGA CTGCATATCC CCGCCCGTGT CGATGCCGAC
ACAAGCGCAC GCCTGCAGGA GGAAGGGATA AAGGCTTTCC GGGCCCTCGG CTGCAGCGGC
ATGTCCCGTA TTGATTTCTT TGTAGAAAAG GGCTCCGGGA GAATTATTCT CAACGAAATC
AACTCGATCC CCGGATTTAC CAGTATCAGT ATGTATCCAA TGCTGATGGA ACATGCTGGA
ATAGGTTTTA CGGAACTCAT CGATAGATTA GTACGGTTTG CTTTGGAAAA AACTCCGGCA
TAA
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| Protein sequence | MPNVTVALLF GGKSSEHEIS IISAKAVSAH IDRTTYTLFP LYISRDGRWF KGRTARKVLD
LDITGLLKSR TIETTNRQLL AMTENRDEDL FDFNFQKEGI EVAFPVLHGA YGEDGKIQGL
LEVFAIPYTG CNVQSSSMTM DKEITKLCAV QAGIHVADYM TVLRPDYLNN RSAIAETIKK
RFAPPFFVKP ANLGSSVGIA KIHSFDELEN ALDEACRLDV KILVEKAIEG REVEVAVLGN
EHPIASVPGE IEPGGDFYDF TDKYIDGSAR LHIPARVDAD TSARLQEEGI KAFRALGCSG
MSRIDFFVEK GSGRIILNEI NSIPGFTSIS MYPMLMEHAG IGFTELIDRL VRFALEKTPA
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