| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1001 |
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| Symbol | |
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| ID | 6374670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1074760 |
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| End bp | 1076034 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642683502 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001959425 |
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| Protein GI | 189499955 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00336631 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAA TCAAACAAAA GCAACAGCGC AATACCGTCA TAATTATCGC TCTGAGCATT
CTGATAGCAG GAGGAGCTGC CGCTTTCTGG ATATCGTCGA AATCAGACAA GATCGAAGTC
ACCACGGAAC AGGTATTCAG AAAAGAGGTC ATTCACTACG TGACGGCAAC CGGAAAGATC
GAACCGGAGC TTGAAGTCAC CATCTCTCCT GACGTATCGG GTGAAATAAC AGAGCTGCAT
GTAAAGGAGG GTGAAGCGGT CGAAAACGGC GCCCTTCTGT TCAAGATCCA GCCGGATGTC
TATATCAACC AGGTTGAGCA GAACAGGGCA CGGCTCAACC TTGGGAAATC ACAGAGTCTC
GAGGCAAGAG CCGGAAAAAT AAAAGCTGAA GATGAACTGC GGAAAGCATC CATGCTCTAT
GCCGACAAAC TCATTTCAGA CTCGGATTAC CTTACCGCAA AAACCAACGC AGAAGCCTCC
AGGGCTGTTT ATGAAGCCGC CCTGTTCACC ATCGAGCAAA ACAAAAGCCT TCTTGATCAA
TCTCTTGAAC AGCTCGACAA GACAACGGTC ACGAGCCCGA TGAACGGCAC CGTTATCGCG
CTTGACAGCA AACTTGGAGA ACGGGTCGTC GGCACCGGGC AGTTTCAGGG AACAAATGTA
CTGCGCATAG CCAACCTCGA CAGTATGCAG GTGGAAGTCG AAGTCAATGA AAATGATATC
GTCAACGTCA ACAGGAACGA CAACGTCATT GTAACCGTCG ATGCGTTCGG TGAACGAAAA
TTTGACGGCA TCGTCAATGA AATATCAAAT TCGGCAATAA CCCAGGCTGA AGGCACCCAG
GAAGAGGTCA CTAATTTCTC TGTTAAAATC CGCATACTCA ACCATGACCG TCTGCTCAAA
CCGGGCATGA GCGCGACAGC GGATATCGAA ACGGAGAGGG TTCAGAATGC GCTTGTCGTC
CCCATTCAAA GCGTCACACT CAGAGAAGAA GATATGGAAG GAAATGTTTC CCGTGACGCG
AAAGAGAAAG AGGATGAGAC TACAGAGCAA AAGGAGGAGA CCCGGGAGAC TTTCCGGAAA
AACAGCAGCC AGGGGGTCTT TGTTATCGAG AATAACACAG CACGGTTCAA ACCTGTAGAA
ACAGGAACAA CCGATAACAC CCATATCGTT ATTCTCGACG GCCTCACAGA GGGTGAAGAG
GTCGTTTCGG GCAGTTACAC CGCCATAACA AGACTCCTCG AGGAGGGTAG CAGAGTGACC
CTGAAAAACG AGTAA
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| Protein sequence | MKKIKQKQQR NTVIIIALSI LIAGGAAAFW ISSKSDKIEV TTEQVFRKEV IHYVTATGKI
EPELEVTISP DVSGEITELH VKEGEAVENG ALLFKIQPDV YINQVEQNRA RLNLGKSQSL
EARAGKIKAE DELRKASMLY ADKLISDSDY LTAKTNAEAS RAVYEAALFT IEQNKSLLDQ
SLEQLDKTTV TSPMNGTVIA LDSKLGERVV GTGQFQGTNV LRIANLDSMQ VEVEVNENDI
VNVNRNDNVI VTVDAFGERK FDGIVNEISN SAITQAEGTQ EEVTNFSVKI RILNHDRLLK
PGMSATADIE TERVQNALVV PIQSVTLREE DMEGNVSRDA KEKEDETTEQ KEETRETFRK
NSSQGVFVIE NNTARFKPVE TGTTDNTHIV ILDGLTEGEE VVSGSYTAIT RLLEEGSRVT
LKNE
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