Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0999 |
Symbol | |
ID | 6374668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1072746 |
End bp | 1073999 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642683500 |
Product | protein of unknown function DUF214 |
Protein accession | YP_001959423 |
Protein GI | 189499953 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000110671 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGACGGT TCCGGAATGA AACATATGAA AGCCTTCTGA TGGCTGTTGC CCAGATCAAG GGCAATAAAA CCCGCTCCTT TCTCACAGCG CTCGGGGTCA TCATCGGCAT TGTCTCCATC ACCATGATGG GAACAGCGAT AAACGGCATT GACGCCGGTT TCGAAAAAAG CCTTTCCATG CTCGGCTACG ACGTCATCTA CGTTCAGAAG AGTTCATGGA GCAGTATGGG GCAATGGTGG CGGTACAAAA ACCGTCCCGA TCTGAAAACG GAATACGCAG CCCAGATTAA CCGGATCATT GCCGATAATC CCGATTCCGG GCTTGAAATA GCGGTTCCGC AAATGTCATC CTACAGCGCT TCAGTAAGTC ATGAAGACAA GAACCTGCAG CAGGTGTTCG CCCTGGGAAC AAACGCCGAC TACCTGCGTA CCGCTTCAGG CGACCTGTCT GAAGGCCGGT TTTTCCTCCC TCATGAATCC GATGGCGGGT CGATGGTCTG TCTGATAGGT GATGATATCG CGACCGGTCT CTTCCCGAAC GAACCTGCTC TCGGCAAAAA GCTGAAACTG AAAAACAGAA CGTTTCGCAT TATCGGAGTA TTCAGAAAAC AGGGAAAGTT TCTCGGACTT TTCAGTTTTG ATAATCAGGT CATCACCCCG TTGAACGCTT TCAAAAAGGT CTTTGGCAAC AGGAGGTACG TCACCCTGCG AATAAAAACA AAAGAGAAGG TCAAGGTCGC CGATGCGAGA GAGGAAATCA GAGGAATCAT GAGAAGACTC AGAAGGCTTC CGCCGGGAAA AACAGATGAC TTTTCGATCA ATGAGCAACA GGCGTTCAAA AGCCAGCTTG ACCCCATTAA AAACGGAATC GCTATCGCAG GTATTTTCAT AACAGGCATG TCCCTTTTTG TAGGCGCAAT CGGTATCATG AACATCACCT TTGTGAGCGT CAAGGAAAGA ACGCAGGAAA TCGGTCTGAG AAAAGCTCTC GGTGCAAGAA GACGGACAAT ACTGCTGCAG TTTCTCATAG AGTCTCTCAG CATCTGCCTG CTTGGAGGAC TTATAGGGCT TGCTACCGCA GTTGCCATCA CCACAGCCAT AGACAAACTT TTACCGGACT TCCCTATCCA GTTCTCTTTT CAGCTTACCG CGATAAGCCT TGTTGTTTCG GTACTCACAG GGATTATCTC CGGACTAGCC CCGGCAATAT CAGCATCTCG TCTCGACCCC GCTGATTCGT TGCGATATGA GTGA
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Protein sequence | MRRFRNETYE SLLMAVAQIK GNKTRSFLTA LGVIIGIVSI TMMGTAINGI DAGFEKSLSM LGYDVIYVQK SSWSSMGQWW RYKNRPDLKT EYAAQINRII ADNPDSGLEI AVPQMSSYSA SVSHEDKNLQ QVFALGTNAD YLRTASGDLS EGRFFLPHES DGGSMVCLIG DDIATGLFPN EPALGKKLKL KNRTFRIIGV FRKQGKFLGL FSFDNQVITP LNAFKKVFGN RRYVTLRIKT KEKVKVADAR EEIRGIMRRL RRLPPGKTDD FSINEQQAFK SQLDPIKNGI AIAGIFITGM SLFVGAIGIM NITFVSVKER TQEIGLRKAL GARRRTILLQ FLIESLSICL LGGLIGLATA VAITTAIDKL LPDFPIQFSF QLTAISLVVS VLTGIISGLA PAISASRLDP ADSLRYE
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