Gene Cphamn1_0995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0995 
Symbol 
ID6374664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1068883 
End bp1069572 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content49% 
IMG OID642683496 
ProductOmpA/MotB domain protein 
Protein accessionYP_001959419 
Protein GI189499949 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0151074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000793596 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACACATG TACAACAATT GACCAAGCCT CTTGTTTTTC TTATGATTCT TGCCATGACT 
ACCTTTACGT GGGGTTGTAC AACGACGACA GGCGCAGGAA GGGGAGCCGG TATCGGTGCA
GCTTCAGGTG CGGTTCTCGG AGGAATTATC GGCAGTCAGA CAGGAAGCTG GGGTAGAGGG
GCACTTCTTG GAGCAGTGAT CGGCGGTGGC GCCGGAGCTC TTATCGGTGA CTATATGGAT
GACCAGGCCA AGGAGATCGA CAATCAGGTC GATGGTGCCC AGGTAGAACG TGTAGGAGAA
GGCATCAGAG TTGTTTTTGA CACCGGTCTT TTGTTCTCAA CCGGTTCTTC AACGCTAACA
TCTACAAGCA GTTACAACAT TCAGAAACTG GCGAATATTC TGAACAAGTA CTCTGACACG
GATATCGTTG TTGAAGGGCA CACTGACTCA CAGGGAAGCG AAACCTATAA TCAGCAGCTT
TCAGAAAAAA GAGCTGAATC CGTTTCTTCA CTTCTCCGTG CCTACAACGT AAGCAAAAGC
CGTATCTCAA CAATCGGCTA TGGTGAAACC CGTCCTGTAG CGTCAAACGA AACCGCTTCA
GGCCGCAAGC TCAACCGTCG CGTCGAGGTA CTTATTTATG CAAATGACAA TCTTATTGAT
CAGGCCGAAA CTGGTGAGTT AAGAATGTAA
 
Protein sequence
MTHVQQLTKP LVFLMILAMT TFTWGCTTTT GAGRGAGIGA ASGAVLGGII GSQTGSWGRG 
ALLGAVIGGG AGALIGDYMD DQAKEIDNQV DGAQVERVGE GIRVVFDTGL LFSTGSSTLT
STSSYNIQKL ANILNKYSDT DIVVEGHTDS QGSETYNQQL SEKRAESVSS LLRAYNVSKS
RISTIGYGET RPVASNETAS GRKLNRRVEV LIYANDNLID QAETGELRM