| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0994 |
|---|
| Symbol | |
|---|
| ID | 6374663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 1068263 |
|---|
| End bp | 1068760 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642683495 |
|---|
| Product | cytochrome c class I |
|---|
| Protein accession | YP_001959418 |
|---|
| Protein GI | 189499948 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00162346 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000785996 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACCA TGGAAAAGAA ATGTAGTATC TCCAGGTTCG CTGTCGGTAT CGTGTTAGCC
GCATCATTGT CTGTCACGTA CGCGTGTCAG CAGGACAAAC CGGATGCATC GGAAGTGCGA
TCACTGACAT CGATGAACTC GGCAGTTGCC GCAGAAAACA CGACAGCGTC AGCAATGAGC
GGGCAGGAGC TGTATACAGC AAACTGCGCG GCTTGTCACT CCATGCGTCC TCCGGCTAAA
ACAGCACCGC CCATAGTCGG CCTGGCTTCA CGTTTCAGAA CAGTTTACGG GAACAAAAGC
GATGCTGTCG GCGCGATGGT ATCCTTTATG AAAAATCCGG ACGCAGAAAA GACTTCTCTG
GGCCCTCAGG CCATAAAACG CTTCGGTTTG ATGCCGGCAA TGGCCATGAG TGACGGAGAT
CTTGAAAAGG TTTCCGGCTG GCTCTGGGAT CAGTATGATT CTGATTTTGA TACCGGTGGC
GGAGGAAACT GCCGCTGA
|
|---|
| Protein sequence | MSTMEKKCSI SRFAVGIVLA ASLSVTYACQ QDKPDASEVR SLTSMNSAVA AENTTASAMS
GQELYTANCA ACHSMRPPAK TAPPIVGLAS RFRTVYGNKS DAVGAMVSFM KNPDAEKTSL
GPQAIKRFGL MPAMAMSDGD LEKVSGWLWD QYDSDFDTGG GGNCR
|
|---|
| |