Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0990 |
Symbol | |
ID | 6374659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 1064535 |
End bp | 1065203 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642683491 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_001959414 |
Protein GI | 189499944 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000957791 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000715536 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGGATTC TCATTATTGA AGATGAATCG GGGATAGCCG ATTTTCTCAG GGAAGGCCTT GAAGAGGAAT GCTTTGCGGT CGATGTTGCA CATAACGGTC GTGAAGGGCT GTCGATGGCG CTGATTAATG AGTACGATCT GCTCATTGTA GACTGGCTTC TTCCTGGCCT GAGCGGTGTG GAGGTGTGCC GGCAGTTCCG GAAAGAACAC GCTCAGGTGC CGGTCATATT CCTTACGGCG AAAGGTGACC TCGATGACGT GATTTTCGGC CTCGAGTCGG GCGCCAACGA TTATATGAAA AAGCCTTTTG CATTTGAAGA ACTTCTGGCG CGAATCAGGG TGCAACTGAG GCTTTCCGGA TCGGAAACCG TGATGATGCA GGCAGGCGGT GTTGAAATGA ATCTTGCCGC TCACAGGGTT ACCTGTAACG GGAAGGATGT CTCACTGACT CCCAAGGAGT TCGCACTGCT GGAGTACCTG TTGCGCAACA GGGGAAGTGT CTGTACCAGA AGCAGGATCA TCGAGCATGT CTGGGACATC CATTTTGATG CCGACACATC GGTGATCGAT GTGTATGTCA ACTTTCTGAG GAAAAAGCTC GATGGGGCGG GTTGCGGCGC GCTTATCGAA ACGGTAAGGG GCGTAGGATA TGTTATTCGG GGAGAGTAG
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Protein sequence | MRILIIEDES GIADFLREGL EEECFAVDVA HNGREGLSMA LINEYDLLIV DWLLPGLSGV EVCRQFRKEH AQVPVIFLTA KGDLDDVIFG LESGANDYMK KPFAFEELLA RIRVQLRLSG SETVMMQAGG VEMNLAAHRV TCNGKDVSLT PKEFALLEYL LRNRGSVCTR SRIIEHVWDI HFDADTSVID VYVNFLRKKL DGAGCGALIE TVRGVGYVIR GE
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