| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0983 |
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| Symbol | |
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| ID | 6374652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1056044 |
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| End bp | 1057531 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642683484 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001959407 |
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| Protein GI | 189499937 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.99676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0550466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGAGC CTAAAAACAA CGACCGGCCA CCACTATACG ACCTGCTTCT GCCTGGTTTC
GGCCTGCTCT TCATGAAAAA GAAAGGACCC GGACTTTTTT TTATCATCTC TTTCACGCTT
TTTCTTGCGA TACTCTTCTG GCGTCATCAG CTGATTCTGG TCAGCATCCG TTCTCTGATA
ACAGGCACTG CACTCCTCGT AACCTCACCC GTCAGTTTTC GTCAGATATT CACCTATGAA
ATCCTCGAGT TATGGATAGC ATCACTCTAT GCACTGCTTG TTCCGCCCCT TCTTTTCTGG
CTCTCTGCAA GAACATTGAA AAAAGCCCGC GCTGAAAAAG AAGAAGATAG CAAAGAGAAA
GAGCTCAGTC TCAGGGAGAT CGGATGGCAT TCATTTAAAA AGCATACTAT TGCGCTCTAT
GCTTCAGTCA CAGTCTTTAT CCTCTACTCA GTAGCGTTTC TTGCCCCGCT TGTCTCTCCT
TTCAGCCCTT TTGAACAGCA GGACTTCCTC GTTACAGCCT ACAAGCAGCC TTTCACCAGA
ATCGACGCCC TCGTCCTCAA TGAACAAAAA GGCGTCACCA TACCCTTGCG AAAAGGCAAC
ACCCGGAGCG ACAGGCTCAC CAATGCACTT ATCAGCGATT TTCAGGTGCT GAAGACACGC
AACGAACCGC AAAAGCTTCG ATTTATCGAC AGTTACAGAA TCGAGGGAAA TTCCGTTATC
TATAAACAGG GACACAGAGA AAAAGTCATT CCTCTTGATA ATCTTGCTGG AGAAAGTGGA
TATGGAAAAG CGCCTTCCGG ATTCATCGTT ACACGCTCCT TTTTTCTCGG GACCGATCAG
TACGGACGGG ACATCCTGAG CAGGGTCATT TACGGATCGA GGATCTCTCT TTCGATCGGA
TTTCTTGTCG TTCTCATCTC TGTCACTCTC GGAACCGTCG TCGGTATTTC ATCCGGGTAT
TTTGGCGGTA TAGTCGATAA CACGCTTATG CGTATCGTCG ATATCCTTAT CGCCTTCCCT
GCGCTTTTCC TCATACTCAT CATCATCGCC ACGTTCGGTA ACTCGATATT TCTCATTGTC
ATCACACTCT CTTTCACCGG ATGGATGGGT GTGGCCCGCA TTGTACGAAG TCAGGTTCTT
TCACTGAAAG AACAGGAGTT CATTCTTGCC GCGAAATCAC TCGGACTCTC CAATCTTCGA
ATTATTTTCC GGCACCTCAT GCCGAACACC CTGACGCCGG TTATTGTTGC CGCTACGCTC
CGTATTGGAA GCATCATTCT TACCGAAGCA GGGCTTTCCT TCCTCGGACT TGGCGTCCAG
CCGCCTACAC CAAGCTGGGG CAACATCATT AACGAAGGAC GTGACAGCCT TCTTAACCAC
TGGTGGATTT CAACATTCCC CGGTATAGCG ATACTAACAA CCGTCGTCTG TTTCAACCTG
ATCGGCGACG GTGTCCGGGA TGCGCTTGAC CCCAGAATGC GAGGGTAA
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| Protein sequence | MKEPKNNDRP PLYDLLLPGF GLLFMKKKGP GLFFIISFTL FLAILFWRHQ LILVSIRSLI
TGTALLVTSP VSFRQIFTYE ILELWIASLY ALLVPPLLFW LSARTLKKAR AEKEEDSKEK
ELSLREIGWH SFKKHTIALY ASVTVFILYS VAFLAPLVSP FSPFEQQDFL VTAYKQPFTR
IDALVLNEQK GVTIPLRKGN TRSDRLTNAL ISDFQVLKTR NEPQKLRFID SYRIEGNSVI
YKQGHREKVI PLDNLAGESG YGKAPSGFIV TRSFFLGTDQ YGRDILSRVI YGSRISLSIG
FLVVLISVTL GTVVGISSGY FGGIVDNTLM RIVDILIAFP ALFLILIIIA TFGNSIFLIV
ITLSFTGWMG VARIVRSQVL SLKEQEFILA AKSLGLSNLR IIFRHLMPNT LTPVIVAATL
RIGSIILTEA GLSFLGLGVQ PPTPSWGNII NEGRDSLLNH WWISTFPGIA ILTTVVCFNL
IGDGVRDALD PRMRG
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