| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0969 |
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| Symbol | |
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| ID | 6374636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1043932 |
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| End bp | 1044867 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642683470 |
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| Product | Squalene/phytoene synthase |
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| Protein accession | YP_001959394 |
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| Protein GI | 189499924 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.641353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACA GCTATAATGG AAAAACGATT GTGCGAGGGT CCGGCCGGGA ACTGACGCTT
CAAAACGCCT ACAACTACTG CCGTCAGATA GCAAAACATC ACGCCAAAAC CTTTTACCTC
GCCACTCTGT TTCTCTCGAA AAATCAGCGC GATCCGATTT ACGCCATGTA TGCCCTGCTC
AGAACGGTCG ATGACCTCGT TGACATGGCG GAAGACAAAA TCACAAACGG CACCCTCACC
CGCGAGGAAT TAAGCTCCAT GATGGCTGAC TGGAAAACCC GCCTCCATGA ATGCTATGAA
GGGAATCACA ACAATGACCC GATCATGATG GCATGGCAGA ACACCCTGGC CAGTCACAGC
ATTCCGATTG AACTGCCGCT GGACCTTATG GACGGCGTCA CCATGGACAT TGATTTCAAA
CCTTTCGAAA CCTTCGACGA CCTCTATGTC TACTGCTACA AAGTAGCCTC TGTTGTCGGA
TTGATGTGTT CTGAAATTTT CGGCTACTGC GATAAAAAAG CGCTGGACCA CGCCATTGAA
CTTGGCATAG CCATGCAACT CACCAATATA CTTCGTGATA TCGGCGAGGA TGTTGACCGC
GGCAGGATAT ATCTACCGCT CGAAGATCTC GACCGATTCA ACTATTCCCG TGATGAGTTC
ATGCGGAAAG AAATAAATGA TAACTTTAAA GCGCTTATCC GGTTTCAGAT TGAACGGGCA
AGAAAATATT ATGCCTCATC CGATCAAGGC ATTCCCATGC TTGAAAAAAA CAGCCGGATT
GCTGTAAAGG TGAGCAGCCT GAACTACTGC AACATCCTCA GAGCTATAGA AGAAAACAAC
TACGATGTCT TCTCTCAACG GGCTTACCGG TCATTTTTCC AGAAAATAAG CACCATTCCG
TATATCTGGC TCGATATGAA GAAGGTGAAC TCATAA
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| Protein sequence | MNYSYNGKTI VRGSGRELTL QNAYNYCRQI AKHHAKTFYL ATLFLSKNQR DPIYAMYALL
RTVDDLVDMA EDKITNGTLT REELSSMMAD WKTRLHECYE GNHNNDPIMM AWQNTLASHS
IPIELPLDLM DGVTMDIDFK PFETFDDLYV YCYKVASVVG LMCSEIFGYC DKKALDHAIE
LGIAMQLTNI LRDIGEDVDR GRIYLPLEDL DRFNYSRDEF MRKEINDNFK ALIRFQIERA
RKYYASSDQG IPMLEKNSRI AVKVSSLNYC NILRAIEENN YDVFSQRAYR SFFQKISTIP
YIWLDMKKVN S
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