Gene Cphamn1_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0920 
Symbol 
ID6374587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp993055 
End bp994326 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content53% 
IMG OID642683422 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001959346 
Protein GI189499876 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.21788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCTC TTATGGACTG CAACAACTTC TATGTCTCCT GTGAACGGGT GTTCAATCCG 
GCACTTTACG GCCGTCCGGT TGTTGTGCTG TCCAACAATG ATGGATGCTT TATTTCACGT
TCCCGGGAAG CCAAGGCTCT CGGCTTGCCG ATGGGGGCAC CGGTTTTCAA ATACAGGGAG
CTGATTAAAA AGCATGATGT GGCGATGTTT TCCCCGAACT TCCCGCTCTA TGGGGACATG
TCGTCACGGG TGATGCACAC CCTTGGCGAA CTGCTGCCGG ATATCGAGAT ATATTCCATT
GATGAAGCCT TTGCCGATCT GCAGGAATTC GGTCGATACG ATCTTGAGCA ATTGGCGCAA
AAGGTCTGTT TGACGATCAG AAGGAATACC GGTATTCCGG TCAGTGTCGG GGTAGGCCCG
ACCAAGACCC TTGCCAAGGC TGCCAACTAT CTTGCCAAGA AAGACACGCG GTATCACGGG
GTGTGCGTGC TTGAGAACGG TATCTCTGTT CGCGAGGCTC TCGGCAACGT TCCTGTTGAG
GATGTCTGGG GGATCGGCAG AGCCTACGGT CGCTTTTTGC GTACCCATTC GCTCACTACT
GCCCTTGATT TCTCCAGGGC TCGACCTGCA TGGGTGCGGC GTCATATGCA TAGTACAGGA
GCGAGGGTTC AGCAAGAACT GAACGGCGAA TCCTGCCTTG CTCTGGAACA GGTACGTCCT
TCCAAACAGA GCATCTGTAC ATCCCGTTCT TTCGGGACAA TGGTGAGGAC GCGTGAAGAT
CTGGAGCATG CGGTAGGCAG TTTCGCGTCG AAATGTGCTC TGAAGTTGCG CAGGGAGGGG
GTTTATGCCG GTCTTGTTAC GGTGTTTCTC TGCACTGACG CATGTGACCG GCGTTCAGAT
CACTACAGAG AGAGCCGTAC AGCGGCAATG CCTTTTGCAA CGCAGAGTAC CTTACGAATA
GTTCGTTATG CGCTGGATAT CCTGAAGGTG ATATTCCGGG ATGGTTATGC CTACAAGAAG
GCGGGAGTGA TTCTGGACGG GTTTTCGCCT GCGTTCCCAT CATCAGTTAC ACCGTCGCTT
TTTGACGGTG ATGGAACCTC AGCAGCTGAT TCACAGGCTC TTATGCAGGC GATCGACACG
ATAAATTTCC GCTATGGTTC AGGAACGTTG AGGCTGGCAG TTGAATCACA GTCGGGATGG
AAGCAGCGTC AGGAAAAACT CTCACAGCGT TACACGACAT GCTGGGAGGA AATTATCCAG
GTGAGAGCGT AG
 
Protein sequence
MFALMDCNNF YVSCERVFNP ALYGRPVVVL SNNDGCFISR SREAKALGLP MGAPVFKYRE 
LIKKHDVAMF SPNFPLYGDM SSRVMHTLGE LLPDIEIYSI DEAFADLQEF GRYDLEQLAQ
KVCLTIRRNT GIPVSVGVGP TKTLAKAANY LAKKDTRYHG VCVLENGISV REALGNVPVE
DVWGIGRAYG RFLRTHSLTT ALDFSRARPA WVRRHMHSTG ARVQQELNGE SCLALEQVRP
SKQSICTSRS FGTMVRTRED LEHAVGSFAS KCALKLRREG VYAGLVTVFL CTDACDRRSD
HYRESRTAAM PFATQSTLRI VRYALDILKV IFRDGYAYKK AGVILDGFSP AFPSSVTPSL
FDGDGTSAAD SQALMQAIDT INFRYGSGTL RLAVESQSGW KQRQEKLSQR YTTCWEEIIQ
VRA