Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0888 |
Symbol | |
ID | 6374555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 961144 |
End bp | 961500 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 642683390 |
Product | hypothetical protein |
Protein accession | YP_001959314 |
Protein GI | 189499844 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000248886 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAGG GATGGGGTAT AAATCTTGAT TATGCAAGTA ATTCGAGATT CAAGCGCATA CAGAGAAACC ATAAGAGGGA ATTCGTATCC TGTTTCAATA ACCTTAATAA AATTAAAGTC TTATTGGAGA AGGGGGCTAA GCTTTCTGAG TTGAATTATC ACCCTGCCTT TTTCCGCTCC GAAGGTAAGG GGTTGTTCAG GATAGGTGAA AGCGGTGTGA AATCTGCAAA AGCGCTGAGA TTGTATGTGT ATCCCGAGAC AAAAACAAAA ACGATATACA TTCTTGGAAT CGGGACGAAG GAAACGCAAC AGGAGGATAT AGCTGCTGCA AAAGATGTTG TCAAAAACAT TGGTTGA
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Protein sequence | MQEGWGINLD YASNSRFKRI QRNHKREFVS CFNNLNKIKV LLEKGAKLSE LNYHPAFFRS EGKGLFRIGE SGVKSAKALR LYVYPETKTK TIYILGIGTK ETQQEDIAAA KDVVKNIG
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