Gene Cphamn1_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0831 
SymbolradC 
ID6374498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp894243 
End bp894914 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content48% 
IMG OID642683339 
ProductDNA repair protein RadC 
Protein accessionYP_001959263 
Protein GI189499793 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.950681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTC ACGATCTTGA TCCTCAGGAA AGGCCGCGAG AGCGATTCAT GATTTCCGGA 
GTCTCCTCTC TCAGTTCGGC TGAGCTGTTG GCGCTGATTA TAAAAACCGG CACCAAAAGG
AAAAACATCC TCGAAACCTG CCAGGATCTC ATAGGCCGTA ACGGTCTGGA AAAGCTTGCG
GATCTTTCCA TGAGAGAACT GCAGGAAACC GATGGTATAG GGCCGGCAAA AGCGATGCAG
ATACAAGCAG TCTTTGAATT GCAGAAGCGC CTGCATTTCA GTCGTAACAC CAATAAAAAA
GTACGATCTG CACGAGATGT TTTTGACTAT ATGTATGGAC GGGTGCCTGA CGAAAGCAAG
GAGCACCTCT TTGTGCTCCA TCTGAACACA AAAAACCAGA TCATCAGCCA CCACCTGATT
TCCGTCGGAA CGCTGAACGC GTCACTTATC CATCCAAGAG AGATCTACAA ATCAGCCATA
CGGGAAAGTT CTCACGCGAT AATCCTGGTA CACAACCACC CTTCAGGAGA TGTTGAGCCG
AGTAACGCGG ATAAGCAGGT AACATCCATC CTCGAACATG CAGGATCAAT ACTGCAGATC
AACCTTCTTG ACCACATCAT AACAGGCAGA GATGCCTGGT TCAGCTTCAG AGAGCATGAA
CTTCTTACCT GA
 
Protein sequence
MRIHDLDPQE RPRERFMISG VSSLSSAELL ALIIKTGTKR KNILETCQDL IGRNGLEKLA 
DLSMRELQET DGIGPAKAMQ IQAVFELQKR LHFSRNTNKK VRSARDVFDY MYGRVPDESK
EHLFVLHLNT KNQIISHHLI SVGTLNASLI HPREIYKSAI RESSHAIILV HNHPSGDVEP
SNADKQVTSI LEHAGSILQI NLLDHIITGR DAWFSFREHE LLT