Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0831 |
Symbol | radC |
ID | 6374498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 894243 |
End bp | 894914 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642683339 |
Product | DNA repair protein RadC |
Protein accession | YP_001959263 |
Protein GI | 189499793 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2003] DNA repair proteins |
TIGRFAM ID | [TIGR00608] DNA repair protein radc |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.950681 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATTC ACGATCTTGA TCCTCAGGAA AGGCCGCGAG AGCGATTCAT GATTTCCGGA GTCTCCTCTC TCAGTTCGGC TGAGCTGTTG GCGCTGATTA TAAAAACCGG CACCAAAAGG AAAAACATCC TCGAAACCTG CCAGGATCTC ATAGGCCGTA ACGGTCTGGA AAAGCTTGCG GATCTTTCCA TGAGAGAACT GCAGGAAACC GATGGTATAG GGCCGGCAAA AGCGATGCAG ATACAAGCAG TCTTTGAATT GCAGAAGCGC CTGCATTTCA GTCGTAACAC CAATAAAAAA GTACGATCTG CACGAGATGT TTTTGACTAT ATGTATGGAC GGGTGCCTGA CGAAAGCAAG GAGCACCTCT TTGTGCTCCA TCTGAACACA AAAAACCAGA TCATCAGCCA CCACCTGATT TCCGTCGGAA CGCTGAACGC GTCACTTATC CATCCAAGAG AGATCTACAA ATCAGCCATA CGGGAAAGTT CTCACGCGAT AATCCTGGTA CACAACCACC CTTCAGGAGA TGTTGAGCCG AGTAACGCGG ATAAGCAGGT AACATCCATC CTCGAACATG CAGGATCAAT ACTGCAGATC AACCTTCTTG ACCACATCAT AACAGGCAGA GATGCCTGGT TCAGCTTCAG AGAGCATGAA CTTCTTACCT GA
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Protein sequence | MRIHDLDPQE RPRERFMISG VSSLSSAELL ALIIKTGTKR KNILETCQDL IGRNGLEKLA DLSMRELQET DGIGPAKAMQ IQAVFELQKR LHFSRNTNKK VRSARDVFDY MYGRVPDESK EHLFVLHLNT KNQIISHHLI SVGTLNASLI HPREIYKSAI RESSHAIILV HNHPSGDVEP SNADKQVTSI LEHAGSILQI NLLDHIITGR DAWFSFREHE LLT
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