Gene Cphamn1_0787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0787 
Symbol 
ID6374454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp842558 
End bp843619 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content51% 
IMG OID642683295 
Productglycosyl transferase family 2 
Protein accessionYP_001959219 
Protein GI189499749 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.163096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.605145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTGA ACAATGAAAT GCCCTCTGTT GAGATAATTA TTCCTCATTA CAGAGGGATC 
GAGATGCTCG AACGCTGTCT CAACTCCCTT GCTGAGACCT CCTATCCTGC AATGAGCATC
TGTATTGTGG ATAACGCAAG CGGCGAGAAA GAGGCGATTT CAGGGCTGAA AGGAACGTTC
GAAGCCCTGC GGGTGGTCTC ACTGCCGTCA AATCGAGGCT ATGCGGGAGG ATGCAACAGT
GCTCTTTTTT CTTCAACCTC CACCTACGTG GTGTTTCTGA ACGATGATAC CGTTGTCGAT
CCATCCTGGC TTTCCTGCCT TGTTAACGCA GCCGAAGAGG ACGGCGGTAT CTCCGCACTT
CAGCCGAAAA TCCTTTCATT GCCCGCACAG CGCAGCGGAA AAAAGGTTTT TGATTATGCC
GGGGGGGCAG GAGGGCTCAT CGACAGGCTC GGTTATCCCT ACTGCTATGG CCGGACAGGC
GCTCACACTG AACAGGATAA CGGTCAGTAT GACCGGGCGG GTGATATTTT CTGGGCTTCA
GGTGTTGCCC TCTTCGCACG CAGGGATTGT GTTACGAATC TCGGCGGTTT TGACGAGGAT
TTTTTCATGC ATATGGAGGA GATAGATCTC TGCTGGCGTA TGCGCCTTCA GGGTCAGCGA
ATCGTTTCGG TACCCTCTGC CGTGGTCTAT CACGAAGGCG GAGCCTCTCT TGCGGAAGGC
TCCGCTGAAA AAATATATCT GAACCATCGT AACAATATGG TTATGCTTCT GAAAAACAGG
AGCAGTGCCG CGCTCTTCAT CGTTTTTCCT TTGCGTCTGC TTCTCGAATG CGCTGCAGCA
GTTCTCTATC TTTCAACCGG AAGGCAGAGG ATACAACGGG CGATAAGTGT ATTTCACGCT
TTGTTCGACA ATCTGAGGTG TTTGCCTGAT ATTTTCAGAA AACGTCGAGC GGTTCAAGCC
ATGAGGAGGG TCGCTGACCC CGTGATTTTC CGTGACGCCC CGGTATCGAT TGTTCTCGGA
AATATGACTT CTTTTCGAAA CGCGCAAAGA AGGACAGCAT AG
 
Protein sequence
MIVNNEMPSV EIIIPHYRGI EMLERCLNSL AETSYPAMSI CIVDNASGEK EAISGLKGTF 
EALRVVSLPS NRGYAGGCNS ALFSSTSTYV VFLNDDTVVD PSWLSCLVNA AEEDGGISAL
QPKILSLPAQ RSGKKVFDYA GGAGGLIDRL GYPYCYGRTG AHTEQDNGQY DRAGDIFWAS
GVALFARRDC VTNLGGFDED FFMHMEEIDL CWRMRLQGQR IVSVPSAVVY HEGGASLAEG
SAEKIYLNHR NNMVMLLKNR SSAALFIVFP LRLLLECAAA VLYLSTGRQR IQRAISVFHA
LFDNLRCLPD IFRKRRAVQA MRRVADPVIF RDAPVSIVLG NMTSFRNAQR RTA