| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0765 |
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| Symbol | |
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| ID | 6374430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 815203 |
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| End bp | 817590 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642683272 |
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| Product | ribonuclease R |
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| Protein accession | YP_001959198 |
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| Protein GI | 189499728 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.429506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.51814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTAAAA GGAAGAGTAA TCAGAATCAG AAGTCAAAGT CGCCGAGGAA AAAAAAGAAA
AATAACGCGT ATTCGCCCGG TGAACAACGG GTCAAGCCGA ACGATCATAT TCTGATCAAC
GAGTTGCTGG TTAAAAAAGG CGAGGCTTCG ATCGCTTCTG AAATCATCAA CTTTCTGTCA
GATAACGAAG GGAAACGATT TCGTTCAGTA GAACTCGCCA AGACTATCGG CTATGAAGAG
TCAAGGCAGC TCCCCGGTTT CTGGTATGTG TTGCATAAAC TTCAGGAAGA GGGGGTTCTC
GACAAGGATT CCAAACGTAC ATACGGACTT GCAGGCCAGG AGCTTCCAAC CTATGAGGAT
GTGCTTGTCC AGGCCCGGCA ATTTCCCCGC CCGGACAAAC AGCATTATCA GGTTGACCAG
TCATATACCG GTCTTATTTC AACGCATCAG AACGGGTATG GATTTGTCAG TGTCGAAGGC
TATGACGACG ATATTTTTAT CAAAGCAGAC TCTCTGGCAG ATGCCATTCA CGGCGATACG
GTTGAGGTGA TCGTCACCAA GGTGCCGAGA ACCTACAAGT CTCAGGTTAC ACCTCATCAG
CGTTGTGAAG GGCTCATCAC AAAGGTTATT GACCGCTCCC TGCACTCTAT TGTCGGTACC
CTGGTCCGGA ATAACCGGAA ATTCACCCTG GCCCCTGATC TGAAGAAAAT TCTTCCTGAA
ATCAATGTAA GGATCAAGGA TTCCGGTGGG GCATCGGATG GTCAGAAGGT CGTTGTCGGC
AATCTTGATT TCCAGAAAAA CGGAGTGATA CGGGCAGTTG TTCTCGAAGT GCTCGGAGAT
GCCGGTTCTT CTCAGGTCGA GGTAAGCGCT ATTGCCCGGA GCAAGGGAAT CGATGAGTCC
TTTGATGAAG AGCTGCTCAC GTATGTCGAG TCTGTCAGCG ACCACATTTC CGACGCCGAC
ATTGAAGGCC GGCTGGATAT ACGGGACAAG AATGTTTTCA CTATCGATCC GGTTGACGCG
AAAGACTTTG ACGACGCGCT CTCGATCCAG ACGCTGTCCA GAGGTCTCTA CAGAATCGGC
GTGCATATAG CCGATGTCTC GCATTATGTC AGTGAGGATT CGCCTCTCGA CCGGGAAGCG
CAGAAGCGGG CTACTTCGGT ATACCTCGTT GATCGCGTTA TTCCCATGCT TCCCGCAAGA
CTTTCTGAAC AGATATGCAG TTTGAATCCC GGCGTTGATC GTATGGCGTT TTCGGTTTTC
TTCAAAATGA AAGCTGATGG CGAGGTACTG CAGCAGGAGT TTGTAAAAAC CGTGATCAAC
TCAAAAAGGC GTTTTACCTA TGAAGATGTC CAGGAAGTGC TGAACAACGG GAAGGGCAAA
TACTATAAGG AACTCCACCT GCTTGATACC ATAAGTACCA GACTCAGGGA GACAAGGCTG
AGCGAGGGCG GTCTTGAGTT TGAAACAGAG GAAGTTCGTT TTAAGCTTGG CAGTAAAGGT
GAGCCTGTAG AAGTGGTTAA AAAAGAGCGA CTCGGCAGTC ATCGACTCAT TGAAGAGTTC
ATGCTGCTCG CAAATCGCAA GGTGGCTGAA TACATCAGTA CAAAATTTAT GCTGAAAGAC
AAGCAGAGTC AGCCCTCCAT TTACAGGGTT CATGGGGCTC CGCAGGAAGA GAAAGTCGCA
ATTCTTACAA ACTTCGTTCG CAGGATCGGC TATACGCTGA AGCTTGACGG AAAAGCAAAG
GGTGGTGCTC CTAAAGTCAG CTCACAGGCG CTTCGCAATC TTTTGAAACA GGTGCACGGC
ACCAACGTGG AGTTTCTTGT TAATGAACTT GTACTGCGTT CCATGGCAAA GGCTCTGTAC
ACCAGCGCCA ACGACGGCCA TTTCGGCCTG GGATTTGAGC ATTACACGCA CTTTACCTCC
CCTATCAGGC GTTACCCGGA TCTGATGGTT CACCGCCTGC TCTTTGAATA TGAAGCATCC
CGCAAGCGGA GAAAGAAACT TTCCGCTAAA CGGCTTGCCG AAATTTCCAC AAAGATCGAG
CAGATCTGCA AAAATTCAAA CGAGCGGGAA AAGAGCGCCA TGGAGGCCGA GCGGGAGTCC
ATTAAGTTGA AACAGGTCGA GTATATGGCT GCCCATGTCG GTAAAGAGTA TTCCGGGATC
ATTTCCGGCG CGACAGACTT TGGTATTTAT GTACGTCTTG AGGAAATTGC GATCGAAGGT
CTCGTGCATA TGAAAAATCT CACGGACGAT TACTATGAGT TTGATGAGGC TACCTATTCC
CTGGTCGGTA AGAGGAGAAA GAGACGGTTG CAGATCGGTA ACAGGACAAA GGTGAAAATC
CTGAAAGTCG ACATGCAGCG CAGGACAATC GATCTGGGAC TGGCGTAA
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| Protein sequence | MVKRKSNQNQ KSKSPRKKKK NNAYSPGEQR VKPNDHILIN ELLVKKGEAS IASEIINFLS
DNEGKRFRSV ELAKTIGYEE SRQLPGFWYV LHKLQEEGVL DKDSKRTYGL AGQELPTYED
VLVQARQFPR PDKQHYQVDQ SYTGLISTHQ NGYGFVSVEG YDDDIFIKAD SLADAIHGDT
VEVIVTKVPR TYKSQVTPHQ RCEGLITKVI DRSLHSIVGT LVRNNRKFTL APDLKKILPE
INVRIKDSGG ASDGQKVVVG NLDFQKNGVI RAVVLEVLGD AGSSQVEVSA IARSKGIDES
FDEELLTYVE SVSDHISDAD IEGRLDIRDK NVFTIDPVDA KDFDDALSIQ TLSRGLYRIG
VHIADVSHYV SEDSPLDREA QKRATSVYLV DRVIPMLPAR LSEQICSLNP GVDRMAFSVF
FKMKADGEVL QQEFVKTVIN SKRRFTYEDV QEVLNNGKGK YYKELHLLDT ISTRLRETRL
SEGGLEFETE EVRFKLGSKG EPVEVVKKER LGSHRLIEEF MLLANRKVAE YISTKFMLKD
KQSQPSIYRV HGAPQEEKVA ILTNFVRRIG YTLKLDGKAK GGAPKVSSQA LRNLLKQVHG
TNVEFLVNEL VLRSMAKALY TSANDGHFGL GFEHYTHFTS PIRRYPDLMV HRLLFEYEAS
RKRRKKLSAK RLAEISTKIE QICKNSNERE KSAMEAERES IKLKQVEYMA AHVGKEYSGI
ISGATDFGIY VRLEEIAIEG LVHMKNLTDD YYEFDEATYS LVGKRRKRRL QIGNRTKVKI
LKVDMQRRTI DLGLA
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