Gene Cphamn1_0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0728 
Symbol 
ID6374393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp770459 
End bp770857 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content46% 
IMG OID642683237 
ProductPilT protein domain protein 
Protein accessionYP_001959163 
Protein GI189499693 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.741529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000801582 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTATC TGCTGGACAC CAATATCTGC ATTTACATTA TCAACAACCG ACCTGAAAAG 
GTATTGCAAC GATTTCGCAA GGAACGCATC GGCAATGTCG GTATATCAAG CATTACGGCT
TCAGAGCTGA CCTATGGCGT CGTCAAGAGT GCTTCGGAAA GGAACCGACT GGCGTTGGAA
TTGTTTCTGG CACCGTTTGA AATCTATCCA TTCGATGAAT CGGTTATCTG GCATTACGGT
GAAGTTCGAG CAGATCTTGA AAAACGAGGC AAGCCTATTG GTGCTCTTGA TACCATGATC
GCAGCTCATG CTCTCGCACT GAACTCGATA CTGATAACGA ATAATACCCG TGAATTCAAC
CGGGTAGAGG GCCTGCATTA TGAAAACTGG GCACAGTAG
 
Protein sequence
MSYLLDTNIC IYIINNRPEK VLQRFRKERI GNVGISSITA SELTYGVVKS ASERNRLALE 
LFLAPFEIYP FDESVIWHYG EVRADLEKRG KPIGALDTMI AAHALALNSI LITNNTREFN
RVEGLHYENW AQ